Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01723 ATGGCTTCTCCTGGTGGAGCCTGTTCATCCGGTTCCAGTTCTCTTCAAAACTCTGGCTCCGACGGAGACAGAGACATGGTGGATCAGAGGAAGAGGAAGAGAATGCTGTCCAACAGAGAATCGGCACGCAGATCGAGGATGAGGAAACAGCAGCACCTGGAAGGTTTGAGTGCGCAATTGGATGAGCTGAAAAAGGAAAACAATCAGATGAACACGAACATAGGCATGACGACCCAGCTGTACCTGAAGGTGGAGGCTGAGAACGCGATTCTGAGGGCGCAGATGGAGGAACTCAGCAACAGATTGAACTCTCTGAACGAAATCATCGGATTCATCAACTCCACGAACTACTTGCTGTTCGATGAGGCACAGGAGACTCAGATGTTCAATGATTGTGGCTTCATGGATGCTTGGAATGGAATGCCCCTCAATCAACCGATCATGGCTTCCGCTGACAATGACATCTTGATGATGTATTGA 480 0.4917 MASPGGACSSGSSSLQNSGSDGDRDMVDQRKRKRMLSNRESARRSRMRKQQHLEGLSAQLDELKKENNQMNTNIGMTTQLYLKVEAENAILRAQMEELSNRLNSLNEIIGFINSTNYLLFDEAQETQMFNDCGFMDAWNGMPLNQPIMASADNDILMMY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01723 159 MobiDBLite consensus disorder prediction 1 52 - -
Spst3g01723 159 Gene3D - 28 83 - -
Spst3g01723 159 FunFam BZIP transcription factor 28 79 - -
Spst3g01723 159 MobiDBLite consensus disorder prediction 1 22 - -
Spst3g01723 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 155 - -
Spst3g01723 159 Pfam bZIP transcription factor 30 81 IPR004827 GO:0003700|GO:0006355
Spst3g01723 159 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Spst3g01723 159 Coils Coil 46 73 - -
Spst3g01723 159 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Spst3g01723 159 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Spst3g01723 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 74 IPR004827 GO:0003700|GO:0006355
Spst3g01723 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Spst3g01723 159 Coils Coil 81 108 - -
Spst3g01723 159 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01723 Spst-Chr3 21033322 21033801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01723 26 152 bZIP Transcription Factor Family AT4G34590 49.286 2.95e-36 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst3g01723 bZIP_1 4.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01723 K25786 - gmx:778139 241.891