Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01721 ATGTATTGTGCTGCTGTTAATTTGCAGGAAATGGCAACTCTAGTTGAACCGCCAAACAGAATTAAGCCAAAGGGAAAGCATTATTATACAATATGGCAAACATTGTTTGAGATTGATACGAAGTACGTTCCAATCAAACCTATTGGCCGAGGAGCATATGGCGTGGTGTGCTCTTCCATCAACAGGGAGACCAATGAGAAAGTTGCAATTAAGAAGATTGGAAATATATTTGAGAATTCTATTGATGCTTTGAGAACTTTAAGGGAGCTGAAGCTGCTTAGACATATTCGGCATGAGAACGTCATTGCTTTGAAAGATGTTATGATGCCAATCCAGAGAACAAGTTTTAAGGATGTCTACTTGGTCTATGAACTCATGGATACCGATCTTCACCAAATTATTAAGTCCACGCAGCCACTTTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTCCTTCGAGGTCTTAAATACCTTCATTCAGCAAATATTCTTCACCGGGATTTGAAGCCTGGGAATCTGCTCATCAATGCCAATTGTGATTTGAAGATATGCGACTTTGGGCTTGCACGAACTAATGGAATTGATGGTCAGTTTATGACAGAATATGTTGTCACTCGTTGGTACCGTGCACCGGAGCTCTTGCTATGCTGTGACAACTACGGCACCTCCATTGATGTCTGGTCAGTAGGGTGCATTTTTGCTGAGATTCTTGGTAGAAAGCCAATCTTCCCTGGCACTGAGTGTCTCAACCAGCTGAAACTAATTATAAGTGTTCTTGGAAGCCAGCATGAATCTCATCTTGAATTTATTGATAATGCAAAAGCCAGGAGGTTTATCCAATCACTGCCCTATACTCGGGGTAGACACTTATCTCAGTTATATCCACAAGCAGATCCATTAGCCATAGATTTGTTGCAAAAGATGCTTGTATTTGATCCAACCAAGAGAATTACTGTCTTAGAAGCTCTCCAACACCCATATATGGCTGGCCTTTATGATCCACGGTGCAACCCTCTTGCTCAGGTTCCCATCAATCTTGACATAGATGAACATTGGGGGGAACAGATGATTAGGGAAATGATGTGGAATGAGATGCTACATTATCACCCTGAAGCTGTTTCTGCCAACGCATAG 1137 0.4142 MYCAAVNLQEMATLVEPPNRIKPKGKHYYTIWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENSIDALRTLRELKLLRHIRHENVIALKDVMMPIQRTSFKDVYLVYELMDTDLHQIIKSTQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGIDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSQHESHLEFIDNAKARRFIQSLPYTRGRHLSQLYPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYMAGLYDPRCNPLAQVPINLDIDEHWGEQMIREMMWNEMLHYHPEAVSANA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01721 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Spst3g01721 378 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 41 336 - -
Spst3g01721 378 FunFam Mitogen-activated protein kinase 126 355 - -
Spst3g01721 378 Gene3D Transferase(Phosphotransferase) domain 1 126 355 - -
Spst3g01721 378 SMART serkin_6 42 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01721 378 SUPERFAMILY Protein kinase-like (PK-like) 34 335 IPR011009 -
Spst3g01721 378 Pfam Protein kinase domain 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01721 378 CDD STKc_TEY_MAPK 36 371 - -
Spst3g01721 378 FunFam Mitogen-activated protein kinase 28 136 - -
Spst3g01721 378 ProSiteProfiles Protein kinase domain profile. 42 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01721 378 Gene3D Phosphorylase Kinase; domain 1 29 365 - -
Spst3g01721 378 ProSitePatterns Protein kinases ATP-binding region signature. 48 72 IPR017441 GO:0005524
Spst3g01721 378 ProSitePatterns MAP kinase signature. 77 180 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01721 Spst-Chr3 21004378 21006485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01721 11 378 MAP Kinase Gene Family AT2G18170 84.511 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Spst3g01721 Pkinase 1.3e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01721 3 21004378 21006485 Spst3g01721 3 21004378 21006485 ECH