Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01656 ATGACACAAGCATTTCCCATCATGGTTTACATTCTGTTATCGCTAGTAGCGTGGGTGGCGTGTCTCAACCAAGAGGGGCTATACCTGTACCAATTCAAGCTCTCTCTCGACGACCCAGACGCGTCTCTCTTGTCGTGGAACTCAAGGGACGCCACCCCTTGCAACTGGTATGGAGTGACCTGTGCCGGCGACGCTTCGAACACCACTGTAACAGCATTGGACCTGTCGGACACCAACATCGGAGGCCCATTCCTCGCCAACGTTCTCTGTCGTCTCCCCAACCTCCTTTCCATAAACCTCTTAAACAACTCCATCAACCAAACGCTCCCTCTCGACATCTCCCTCTGCCGCAATCTCCGCCACCTCGACCTCTCCCAGAACCTCCTCACCGGTCTCCTCCCTGCCACGCTCCCGCTCCTCCCCAACCTCCGCTACCTCGACCTCACCGGCAACAACTTCTCCGGCCCCATCCCGGACTCCTTCGGAACCTTCCAGAACCTCCAAGTCCTCTCCCTCGTCTCCAATCTTCTAGAAGGCACCATCCCCCCCTCCTTGGGCAATGTATCCTCTTTGAAAATGCTCAACCTCTCTTACAACCCCTTCTTCCCGGGTCGGATCCCTCCAGAGCTTGGGAACCTTACCAACCTCGAGGTTCTCTGGCTTACCCAATGCAACCTCGTTGGCGTCATTCCAACTTCTCTCGGGAACCTCAACAAACTGCAGGACCTCGACCTCGCGCTCAATGACCTCTACGGCTCCATCCCGAGTTCGCTCACTCAGTTAACAAGCCTTACGCAGATCGAGTTGTACAACAACTCGCTCTCCGGTGAGTTGCCTCGGGGAATGGGGAATCTCACCCGCTTGAGGCTGCTTGACGCTTCCATGAACCACTTGACGGGGAAGATTCCCGAAGAGCTTTGTTCTTTGCCGTTGGAAAGTCTCAACTTGTACGAAAACCGTTTTGAGGGAGAGTTACCGGCCAGCATTGCGGATTCGGAGAATCTGTACGAGCTTAGGCTCTTCGGGAACCGCCTCACCGGGAGGTTACCGGCGACTCTCGGCAAGAATTCGCCGCTCCGGTGGCTGGACGTTTCGAGCAACCAGTTCTGGGGGCCTATCCCTGCGACTCTCTGTGATAAGGGTGCTCTGGAGGAGCTTCTGGTGATTTACAATCTTTTCTCCGGGGAGATTCCGGCGAGCTTAGGGACGTGCCAGAGCTTGACACGTGTGAGACTCGGATTCAACCGGTTGTCCGGCGAAGTTCCCGCCGGGATCTGGGGGCTTCCCCACGTGTATCTTCTCGAGCTCGTCGATAACTCTTTTTCGGGGTCTATTGCGAGGACCATTGCTGGTGCGGGGAACTTGTCTCTGTTGATTTTGTCGAAGAACAACTTCTCGGGAACGATTCCCGATGAGGTTGGGTGGTTGGAAAATCTCGTGGAGTTTTCCGCCAGTGATAATAAGTTCACTGGTCCGCTTCCTGATAGCATTGTGAATCTTGGGCAGCTTGGGATTCTTGATTTTCATAACAATAGACTCTCTGGGGAGTTGCCGAAAGGGATTCGTTCGTGGAAGAAGCTTAATGATTTGAATTTGGCCAACAATGAGATTGGCGGGAAGATTCCTGATGAGATTGGGGGTTTGTCCGTGCTGAATTTTCTAGATCTTTCTAGAAACCGCTTTACGGGGCAAGTCCCTCACGGGTTGCAGAATCTGAAGCTGAATCAGCTTAATTTGTCTTATAATCGTTTGACTGGTGAACTTCCTCCTCTGTTGGCTAAGGATATGTATAGGTCTAGTTTCCTTGGTAATCCTGGCCTATGTGGGGATTTGAAGGGGTTGTGTGATGGTAGGGGTGATCCAAAGAGTGTAGGTTACGTTTGGCTGCTTCGAGCGATTTTTGTTGTGGCCACTTTGGTTTTCCTTGTTGGTGTGGTTTGGTTTTACTTTAGGTATAAGAATTTCCAGGACGCCAAGAGGGTCATTGATAAGTCGAAGTGGACGTTGATGTCGTTTCATAAACTGGGTTTTAGTGAAGATGAGATTTTGAATTGTCTTGATGAAGATAATGTGATTGGAAGTGGTTCCTCGGGGAAGGTCTACAAGGTTGTGCTTAGCAGTGGGGAGGTTGTTGCTGTGAAGAAGATATGGGGAGGAGGGGTTAGGAAGGAGGTGGAGAGTGGGGATGTTGAAAAGGGTAGGGTTCAGGACAATGCTTTTGATGCGGAGGTTGAGACTTTGGGCAAGATCAGGCACAAGAACATAGTCAAGCTGTGGTGTTGCTGCACCACCAGGGATTGCAAGCTCTTGGTTTATGAATATATGCCTAATGGAAGTCTCGGTGATTTGCTGCATAGTAGTAAAGGAGGGTTGTTGGATTGGCCAACAAGGTATAAGATAGCTGTGGATGCTGCAGAAGGCCTCTCTTATCTTCATCATGATTGTGTACCCCCAATTGTTCATAGAGATGTGAAATCTAACAATATTTTGTTGGATGGGGACTATGGTGCGAGGGTGGCTGATTTTGGAGTAGCTAAGGCGGTTGAAACCACAGCAAAAGGAACTAAATCCATGTCCGTCATAGCTGGCTCTTGTGGCTATATTGCACCAGAATATGCATACACGCTGAGAGTGAATGAGAAGAGCGACATATACAGTTTTGGGGTTGTGATACTCGAGTTGGTTACTGGAAAACGCCCGGTGGACCCTGAATTTGGGGAGAAAGACTTGGTTAAGTGGGTGTGCACTACCTTGGACCAGAAAGGCGTGGATCATTTAATTGACTCAAGGCTTGACTCTTGTTTCAGAGAAGAAATATGCAAGGTCTTCAACATTGGACTCATGTGCACTAGTCCTCTTCCGATTAACCGGCCTTCAATGAGAAGAGTAGTGAAGATGTTGCAAGAGGTGGGCACAGAGAACCAAACCAAGCCTGCCAAGAAAGATGGGAAGCTATCCCCTTATTACTGTGACGATGTCTCGGATCATGGAAGTGTTGCATAA 3003 0.5015 MTQAFPIMVYILLSLVAWVACLNQEGLYLYQFKLSLDDPDASLLSWNSRDATPCNWYGVTCAGDASNTTVTALDLSDTNIGGPFLANVLCRLPNLLSINLLNNSINQTLPLDISLCRNLRHLDLSQNLLTGLLPATLPLLPNLRYLDLTGNNFSGPIPDSFGTFQNLQVLSLVSNLLEGTIPPSLGNVSSLKMLNLSYNPFFPGRIPPELGNLTNLEVLWLTQCNLVGVIPTSLGNLNKLQDLDLALNDLYGSIPSSLTQLTSLTQIELYNNSLSGELPRGMGNLTRLRLLDASMNHLTGKIPEELCSLPLESLNLYENRFEGELPASIADSENLYELRLFGNRLTGRLPATLGKNSPLRWLDVSSNQFWGPIPATLCDKGALEELLVIYNLFSGEIPASLGTCQSLTRVRLGFNRLSGEVPAGIWGLPHVYLLELVDNSFSGSIARTIAGAGNLSLLILSKNNFSGTIPDEVGWLENLVEFSASDNKFTGPLPDSIVNLGQLGILDFHNNRLSGELPKGIRSWKKLNDLNLANNEIGGKIPDEIGGLSVLNFLDLSRNRFTGQVPHGLQNLKLNQLNLSYNRLTGELPPLLAKDMYRSSFLGNPGLCGDLKGLCDGRGDPKSVGYVWLLRAIFVVATLVFLVGVVWFYFRYKNFQDAKRVIDKSKWTLMSFHKLGFSEDEILNCLDEDNVIGSGSSGKVYKVVLSSGEVVAVKKIWGGGVRKEVESGDVEKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDYGARVADFGVAKAVETTAKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKRPVDPEFGEKDLVKWVCTTLDQKGVDHLIDSRLDSCFREEICKVFNIGLMCTSPLPINRPSMRRVVKMLQEVGTENQTKPAKKDGKLSPYYCDDVSDHGSVA 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01656 1000 FunFam Leucine-rich receptor-like protein kinase family protein 206 304 - -
Spst3g01656 1000 SUPERFAMILY Protein kinase-like (PK-like) 680 967 IPR011009 -
Spst3g01656 1000 SUPERFAMILY L domain-like 311 608 - -
Spst3g01656 1000 Gene3D Ribonuclease Inhibitor 20 202 IPR032675 -
Spst3g01656 1000 SUPERFAMILY L domain-like 39 374 - -
Spst3g01656 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 775 984 - -
Spst3g01656 1000 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Spst3g01656 1000 FunFam Receptor-like protein kinase HSL1 670 774 - -
Spst3g01656 1000 Pfam Protein kinase domain 688 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01656 1000 Pfam Leucine Rich repeat 66 82 IPR001611 GO:0005515
Spst3g01656 1000 Pfam Leucine rich repeat 117 153 IPR001611 GO:0005515
Spst3g01656 1000 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Spst3g01656 1000 FunFam Receptor-like protein kinase HSL1 310 617 - -
Spst3g01656 1000 Gene3D Phosphorylase Kinase; domain 1 670 774 - -
Spst3g01656 1000 Gene3D Transferase(Phosphotransferase) domain 1 775 992 - -
Spst3g01656 1000 Gene3D Ribonuclease Inhibitor 333 617 IPR032675 -
Spst3g01656 1000 ProSiteProfiles Protein kinase domain profile. 686 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01656 1000 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 22 188 - -
Spst3g01656 1000 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 233 969 - -
Spst3g01656 1000 SMART LRR_typ_2 164 188 IPR003591 -
Spst3g01656 1000 SMART LRR_typ_2 261 285 IPR003591 -
Spst3g01656 1000 SMART LRR_typ_2 500 524 IPR003591 -
Spst3g01656 1000 SMART LRR_typ_2 117 139 IPR003591 -
Spst3g01656 1000 SMART LRR_typ_2 213 236 IPR003591 -
Spst3g01656 1000 SMART LRR_typ_2 548 571 IPR003591 -
Spst3g01656 1000 SMART LRR_typ_2 92 116 IPR003591 -
Spst3g01656 1000 SMART LRR_typ_2 140 163 IPR003591 -
Spst3g01656 1000 Gene3D Ribonuclease Inhibitor 262 332 IPR032675 -
Spst3g01656 1000 Gene3D Ribonuclease Inhibitor 203 261 IPR032675 -
Spst3g01656 1000 SMART serkin_6 686 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01656 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01656 Spst-Chr3 20063699 20067141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01656 19 1000 Receptor kinase-like Gene Family AT1G28440 71.891 0.0 1439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst3g01656 Pkinase 4.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01656 - - gmx:100819887 1746.48