Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01653 ATGGAGTCGCGAGTGCTGTCACGCGCCGGGGCCTTGTCCTCCCTCCCTCACCTCCGCAAGCCTCCCCGGGAGACCATCGGCTGCGCCTCCTTCGTCGCCGTGAAGGCCGTGGGGTCCTTCGCGGACGGTGGGAATCTGATTTGGGGGAGGCAGCTGCGTCCGGAGCTCTGCTCGCCGGCGCTGAAGAAAGAGACCGTCCTCCTCCGGCCTTGCCTGGCTGCCGCCTCCTCGCCGGCCGAGGGTGGTGATTCCGCCGGAGAAAAGGTTGCTCCGGCGGGATTCTTCGACAAGTACCCAGCTTTGGTCACCGGGTTTTTCTTCTTCACGTGGTACTTCTTGAACGTGATTTTCAACATCCTCAACAAGAAGATCTACAACTATTTCCCCTATCCATACTTCGTATCCGTTATCCATTTATTGGTGGGTGTGGTATACTGTTTGGTGAGCTGGACCGTGGGCCTTCCTAAGCGTGCTCCAATAGACTCCAACCTACTGAAGTTGCTCATTCCGGTGGCTGTGTGCCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACTCATACCATTAAAGCTCTTGAACCATTCTTCAATGCTGCTGCTTCACAGTTCATACTAGGCCAATCAATCCCCTTGACTCTGTGGCTGTCACTGGCTCCCGTTGTTATTGGTGTGTCCATGGCATCTTTGACCGAGCTCTCATTCAACTGGGTTGGCTTCATAAGTGCTATGATTTCAAATATTTCCTTCACATACCGGAGCATTTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATGTCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGTATACCACCTGCCGTAATTGTGGAAGGGCCTACTCTGTTGAAGCACGGCTTCAATGATGCTATTGCTAAAGTAGGTTTGGTCAAGTTCGTCTCAGATCTCTTCTGGGTTGGTATGTTTTACCATCTCTACAACCAGGTGGCTACCAACACACTGGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGGAACGTACTGAAACGTGTATTTGTGATTGGATTTTCAATTATTGTCTTCGGTAACAAGATTAGCACCCAAACTGGTATAGGAACAGCCATTGCAATTGCTGGAGTGGCACTCTACTCTCTCATCAAAGCCAGGATGGAGGAAGAGAAGCGACAAGCGAAAGCAGCGTAA 1218 0.5049 MESRVLSRAGALSSLPHLRKPPRETIGCASFVAVKAVGSFADGGNLIWGRQLRPELCSPALKKETVLLRPCLAAASSPAEGGDSAGEKVAPAGFFDKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPAVIVEGPTLLKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTAIAIAGVALYSLIKARMEEEKRQAKAA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01653 405 PANTHER SOLUTE CARRIER FAMILY 35 104 396 - -
Spst3g01653 405 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 399 IPR004696 GO:0016020|GO:0022857|GO:0055085
Spst3g01653 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 391 - -
Spst3g01653 405 Coils Coil 392 405 - -
Spst3g01653 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 238 - -
Spst3g01653 405 Pfam Triose-phosphate Transporter family 102 389 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01653 Spst-Chr3 20027003 20030745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01653 1 403 Antiporters AT5G46110 77.724 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01653 K15283 - gmx:100794336 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01653 3 20027003 20030745 Spst3g01653 3 20027003 20030745 ECH