Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01651 ATGGCTCCAAATGTTCAGTGCTGGGCATTTGATGCACTTCTGAATTCACTTGATTCACGTGGGGTGAGGGAATCTCATCTGCGACTAATGTTGCAAAAGGTTGAGAGTTCCTTTAAGGAAAATGTTCGTAAGAATACACAATGTTCTAAAGTTGGAAGCAGAGCCGAAGCATGTGTTAAAAATGAAGCTGACGAAACCGATTCCAGTCCTGATCGCCATACTGGATCTGACAGTCCTAGCAGTACGCTTTGTGGCTTGAACTCTGACAGTTCGGAAACTTCCTCATCTTTCAAAATTGAGCTTGGGAAAAGTGAGACAGACAAGAAATCTGCCTTGAGAAGGTATCAAGATTTTCAAAAGTGGACGTGGAAAGAATGCTATAATTCATCGATATTATGTGCAATGAAATATGGGAAGAGAAGATGCAAACCTCAGGTTGTCGTCTGTGATATCTGTCTCAACCCTTATTTCTTTGAAGATTCTCATTGCAATTGTTGCCACCGGACTTTTCCCTCAAACAATGGATTTAATTTTACTAAACATGCATTTCAATGTGGAGACAAATTATCAAAAGATATTTGTATTTTAGATTCTTCTCTTCCCTTGCGGACAAGATTGATTAAGGCCCTGCTAGCTTTTATTGAGGTTTCTATTCCACCTGAAGCATTTCAATCAAATTGGATCGAATATATTAGGAGGCATTGGAGCGTGAAGTTGAGCAAATCATCTTCTGTTGAGGAACTGTTACAGATATTGTCCCTACTTGAGAGAGCATTGAAGCGGGACTTTCTATCATCAACCTTCTCTACTACAGGGGAACAGTTGGGGTTGAATGCTACGTCAGAGAGTGCTGCACAAACCTCTGCCGATCCTGAATCAGTTGCTGTACTTCCATGGGTTCCACTGACCACTGCAGCCGTGGCTCTCAGACTTTTTGAGTTTGATGAATCAATTGTCTACGTACTGCATGATAAACCCGAGCCTTGTGAGGAGAAAGAAGATAGGCAATACGTAAAGCTTCCGTCAAGATACAATGGTTCCAAATCTATTAAAGTTTCTGAACCAGTAGACTTGGACCGTGATGAATTCATGAAAGTTAAATCTACTTCTGCGAAAGTTGTGAAAAGCAACAATAAACGAGGACGAGGGAGTTCTGTCAAAGGACGGGGTAAAAATATATCTAAAGCCAAACAAAATAATGGCCGGCGGCGTAGTGCTAAGGTTGCTGGGAATCTAAGTCAAAGGATAAAACAACAGGGAGGGGGATCACAAGGACAAGCTGGTGGGCGTGGTCGACGGACAGTTCGGAAAAGAAGAGTAGGCAAAAAGGCTGTTGAAGATCTTTTGCTGAGCCATAGGGGTGCCTCTCATAGCTCCAAAATTGCTATGGAATCGTTGAGAAACTTGGATGAGGATTGGGATGATGAAAAGGCAAGTCCAATGACTCCCATCCACATGGGGGCTGCTAACGTTAGTAACAGCACTGATGAGGCTGAATCTGATGACAATGTCCAAGCAATGGAGTCTGATGACAATGTCCAAGCAGTGGAATCTGATGACAATGGGCAAGCAGTGGAATCTGATGACAATGGCCAAGCTGTGGAATATGATCAAGGAAACTGGGAAATAGGTTTTAATGGCAACTCCAGTAGCAGATGGAGGAGGGATTTGGTAATGAGTGATGAAGATGTGGAAGCTTCCGAAGATGACAATGGCATCGAAGAGAATGAAGAGGAGGATTCAGAGGCAGATGGTATGAGCGAGGGTTCAGATGGTACCGCAAACAGAATTGTAAATGAAGAAAGCTCAGACTCGGATGTCTCTGAAGATTCTTCTGATTAG 1842 0.4283 MAPNVQCWAFDALLNSLDSRGVRESHLRLMLQKVESSFKENVRKNTQCSKVGSRAEACVKNEADETDSSPDRHTGSDSPSSTLCGLNSDSSETSSSFKIELGKSETDKKSALRRYQDFQKWTWKECYNSSILCAMKYGKRRCKPQVVVCDICLNPYFFEDSHCNCCHRTFPSNNGFNFTKHAFQCGDKLSKDICILDSSLPLRTRLIKALLAFIEVSIPPEAFQSNWIEYIRRHWSVKLSKSSSVEELLQILSLLERALKRDFLSSTFSTTGEQLGLNATSESAAQTSADPESVAVLPWVPLTTAAVALRLFEFDESIVYVLHDKPEPCEEKEDRQYVKLPSRYNGSKSIKVSEPVDLDRDEFMKVKSTSAKVVKSNNKRGRGSSVKGRGKNISKAKQNNGRRRSAKVAGNLSQRIKQQGGGSQGQAGGRGRRTVRKRRVGKKAVEDLLLSHRGASHSSKIAMESLRNLDEDWDDEKASPMTPIHMGAANVSNSTDEAESDDNVQAMESDDNVQAVESDDNGQAVESDDNGQAVEYDQGNWEIGFNGNSSSRWRRDLVMSDEDVEASEDDNGIEENEEEDSEADGMSEGSDGTANRIVNEESSDSDVSEDSSD 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01651 613 MobiDBLite consensus disorder prediction 73 94 - -
Spst3g01651 613 MobiDBLite consensus disorder prediction 60 94 - -
Spst3g01651 613 MobiDBLite consensus disorder prediction 369 442 - -
Spst3g01651 613 MobiDBLite consensus disorder prediction 486 500 - -
Spst3g01651 613 MobiDBLite consensus disorder prediction 404 425 - -
Spst3g01651 613 MobiDBLite consensus disorder prediction 473 613 - -
Spst3g01651 613 MobiDBLite consensus disorder prediction 562 586 - -
Spst3g01651 613 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 9 613 IPR044977 GO:0006357
Spst3g01651 613 MobiDBLite consensus disorder prediction 507 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01651 Spst-Chr3 20013077 20015696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01651 9 548 Homeobox Transcription Factor Family AT1G28420 34.690 1.06e-73 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01651 - - gmx:100818817 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01651 3 20013077 20015696 Spst3g01651 3 20013077 20015696 ECH
Spst3g01651 3 20013077 20015696 Spst6g00814 6 7433505 7443323 PCT