Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01647 ATGGATTCTGACTTCTGGACTTCGCGTCTTGCCGCCGCCAAACGCCAATATACGCTTCAGCATCACCATCAAAATTCTCATTTAGATCGGTTGGGAATTGATGATTTTGATGTGGAAGAAGAGGTGCGACCCGATTTCCCGTGCCCCTATTGTTATGAAGACTTTGACATCGCATCTCTGTGTTCTCATCTTGAAGACGAACATTCTTATGAATCAGGAGTCACGATTTGTTCCATATGCTCCGTTAAAGTAGCAAGGGACATGTTAAGTCACATAACGCTGCAACATGGGCACTTATTTAAGATATCCTTTTACACCGATAGAAGACGCAGGTTAAGAAGAGTTGCTATTCCAAACAGTCAGACATTGTCTCTCTTGGGCAGAGATCTTCGTGAGGCTCATCTACAGGTGCTTCTTGGTGCTGGTGCTGGTGCATACCGGTCAAATAGTGCAGCAGTGTCTAATGTTGCTACTGATCCCTTTCTATCCTCATTTATTTTGAATTTCCCGTCCTGTGAAGCCGAAGAAATTTCAAAATCTGTGGTAACAAGTGCTGAGGATTCTTCTGCCAAAAATGTGACACCTGAACATATTTGGAAATCGAGTTTTGACCCCTCGTTGAGTACCGAAGAACGAGAGAAAAGGATGAGACAAGCCGCTGGGAGATCTGGTTTTGTGCAGGACTTGTTTCTTTCAACTCTGTTAGGCGACTAA 714 0.4398 MDSDFWTSRLAAAKRQYTLQHHHQNSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSYESGVTICSICSVKVARDMLSHITLQHGHLFKISFYTDRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGAGAGAYRSNSAAVSNVATDPFLSSFILNFPSCEAEEISKSVVTSAEDSSAKNVTPEHIWKSSFDPSLSTEEREKRMRQAAGRSGFVQDLFLSTLLGD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01647 237 Pfam Stress-induced protein Di19, C-terminal 123 234 IPR027935 -
Spst3g01647 237 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Spst3g01647 237 PANTHER PROTEIN DEHYDRATION-INDUCED 19 32 235 IPR033347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01647 Spst-Chr3 19979689 19981699 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst3g01647 Di19_C 7.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01647 - - gmx:100792230 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01647 3 19979689 19981699 Spst3g01647 3 19979689 19981699 ECH