Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01606 ATGGCTCTTGATGCAAATGTTGCCATTGAAGATGTCTCCTCGAGAGGTGTCTCTGTGGATCCTACAAAAAGAAGACATGAAGTTGTGAAAAAAGTGATACTAAACGGTAAAGAAGGGTCTTTAGATGATGGATTTACCTGGAGAAAATATGGGCAAAAGGATATACTAGGAGCCAAGTTTCCAAGGGGGACTAAGGTTGCCATGCCAAAGAGAAAAGGAAGAGGACGACCAAAAGGGTCCAGGGTTCAGAAGAAGGTTAAAGAGAGTCAAGATGGTGAATTGGTCATACCAAATACTCCCTTGAATGTGGTGAAAGCTGATCCTGACTTTATTGAGGAACAGGAGGGAGGTACCAGTATGCCAAAGAAAAAAGGACGGGGACGACCAAAAGGATCACAAGCTCAGAATTGTCAAGAGAGTGGGCACAGCAACTTGAATAATCGCATTCATCCATCTGATATGCTTGAAGTTGGTTTTGACTGTGAAGAACTTGAAGATGCAGATACAGTTATGCCCAACAGAAATGGACAAGAACAATCAAAAGGGTCGGGGCAGTTCTGTCAAGAGAATGCTGATTGTGAGAACTTCTATAACAATCCATCAAATATAATGGAAGTCAGTCTCCGATGTAAGGAGGAGCAGGAAACTGATACAATAGTCAAGCCTAATAAAAAAAAGGGAAGAGGACAGACAAGAGGATTGTCACTTCAAATGAAGCGTCAACAGAGTGCAGATGGAAAGTTGGATGTTATCATTCATCCTACAAAGTTGGTGGCAGTGGGTCCAGGCCGCAATGATTTCATTACTGATCTGTCTCTTATTGTACGCCAGAATGCACGTCTTAATGTGCGCCAGTGGAAGAAGGTTCCGCAAAGTACTAGGGATACAATAGTGCAAAATATTCTGAATAATTGGAGACTTCCAGATACGGATATGGTACGGAAGGCTATTCTACATGAAGCAGGCCGTTTATATCAGAATTGGCGCTCCAGGCTTCGTGATTACTACTTAAAATTCGAGACAAAGGAAGAGGCCTTGAAGCATGTCCCTGATGATATCAATGATTCTGATTGGCAATTCTTGGTTGATTATTTTAGCAGCCCGTATTTTGAGATAATGAGTGCAAAAAACAAGGCAAATAAGGCAAAACAGCGTACAAAACATACTACTGGGTCAAAATCCTTTATGGCAATCAGCTATGATGCACGTGATCCAGTGACGGGAATGGAGCCCGATATGCAAACTTTTTGGCAGTTGACACACAGAAAGGAAAATGGGGAATGGATTGACGAAGCATCTAAGGAAATCAATGACAAAGTTGCTGAACAAATTAATGAGAAAAGATGCCAAATAGAGGAAGTGGGGGAAACAAATGAAGAAGAAATAATTAATACTGCCTTCAAGACATTGGTTGGAAAGAGATCATATATGCAAGGTGTTGGTCCTTTCGGAGCAGGACTAAGGTCATCATCATCAAGTTCCAGTAAAATTCAACAGCTGCAGGCTGAATTAGATGCCCAGAAGAGAGAGACAGAGAATGCTAGGAAAGAATGCGATGAAATAAGAGCTAGACTTGTTATGGTTGAGTCCTACCTAGAGGATGAGCGGCAGAAACGCACAGAGATAGAGGGTCATCTCTTGGATCGTCAAAATGAGATGCAGGAGATCAGCTGTCAGGTTCAAACCACCATCCAGGCTGCATTGTCTCAGTATCTTCCTCCAAAAAGCGAGGCAGAGACCTCAACAAAGAATAAAAGAAAGATCGCAGAACTGGAAGCACAACTGAATGAGGCAGAGGATGTGATAACAGATATTAGATCAGAATTGGTAAACACTGTTGCCGTGGCTTTCAAGATAATGTCTGAGATTGAACTTGTGGGTCCTCTTGTTGGAGACATGAGACCACTTGGGGTTGGAACAGTATATGCTAAAATTTTATCTAAATTTGCATCTTCCAAAAATCTAGAGGACAATTATGGAATTTTGGTCAAAGATATGGAGATGCTACAAGCAATAAAGAAGGATAAAGAGATGGAGGCTCAAAGAAACAAACACAGAGATACCACTAATGCCTACAAACTGTGGAGAAACAGGGTATCAGATGTCACAGAAGAAGTGCAGAAGCTGAAAGTTAAATATGAAGAGAACATGTTACCCTGGTGGCTCCTTCAACGACGTTCCAGTCTGAGTGAAGAGATGGAGAAGAAGTGCAACTGTGTTCGTGAACTTATGAAGGATGAATGTTTAAGAGATTTTCTTGTTGATAAACCACCTGAGCCTGTATTAAGGGAGTTGAATGTTCCACAGATAAGTGGATATCCAACCCTTCAAGGCGCCTTGGATAATATCCTAGGTTTGCTAAAAAATAATAAGGTCAAAGTCATTGGAGTGTGTGGTACAAAAGGAGTGGGGAAAACAACAATAATGCGGAACCTAAACAACAATGAAGAGGTAGCTAGACTCTTTGAAATTGTCATTTTTGTGAAAGTTACAGCTGAGAATCATAAGCTTCAAGAGAAGATTGCTCATCGGTTGATACTGGAGAAAGAAACCAACAAGGAGCATAGTGATGATATTGCAAGAAGAATACACAAAGAACTAGAGAAGAAGAAGTATCTATTGATTTTGGATGAGGTTGAGGATGCCATCAATTTGGAGCAGTTGGGTATCCCAAGAGATAATAACAATGACAGTAAGGTGGTGATTGCCACTCGATTCCCTATGGTTTATAAGTTGAATAGGGTGCAGAGGGTCATCAAAGTCATGGAGCTATCTCCCGAGGAAGCATGGAAGATGTTTAGAGATACTGTCCATGCCTTTAATCCTAAGATTGATTCCCCTGACATTCAGCCTACAGCAAAACTTGTATGCAAAAGATGCTCTCGTCTTCCACTTCTCATTTACAATATAGCAAACTCTTTCAAATTGAAAGAGTCTGCTTCTAGTTGGTGGGCAGGGCTTGAAGATCTTAAACCATGGCCAGAACTTCAAACTCAAGGGTTAGAAGAGTTGTACTCATGTCTGAAATTTTGTTATGATGAACTCAATGATAAAATGAAGCAGAAATGTTTCCTATACACTTCACTGTATCCTGCAGATAGCAAGGTTTACTCAGATTACTTAGTGGAGTGTTGGGCAGCGCAAGGTTTACTTGGTGATATCAATGACAAAAGGTCGTATCAAAGAGCACGAAATTGTGGTATTGACATATTAGAGCATCTTGCTAATGTCTCTCTATTAGAGAAAGGGGAAGCAATGATGTATGTCAACATGAATCATTGCATGAGACAACTTGCATTACACATATCCTCTAAAGATCCAGAGTGTAGCTTTTATCTCCAAGATGGTGACGAATCTGAAAATCTCTCAAATTCAAGAGCTTGGCAGCAGGCTAGGTGGGTCTCTCTGAGACAACTACTTGATTTACCAACAAGCCAAGATTGCAGCATGATTTTGACATTGTTGCTGAGAAAAAATTCAAAACTAACTTCACTACCAGAGAGTTTCTTTGAGAACATGAGCAGTCTACTTCTGTTAGACTTGTATAGTAGCATGATTACACAACTGCCATCATCTCTCTCAAACTTGACTGGTCTACGGGGTTTATTCTTGAACAGGTGCGAGCTAATGGAGTCACTATCATCTGAAATAGGATTACTTCAATTTCTAGAGGTCCTTGACATACGAGATACTAAAGTAACTTTCATACCTCTTCAAATTGGATGTTTGACTAATCTAAGATGCCTGCGAATCCCATTCATTGCAAGTGAAGATAATGAAGCTCAAAATGTTCATGTGATTTCAAAGCTTCATAGATTGGAAGAATTAACTATTCAAGTCATATCCTATGAACAGTGGTGCAATGATGCAAAAAATGTTCTGCAACATGTGGCTTCTTTGGAAAATGTAACTCATCTCAGATGTTGTTTTCCCTCCTCAATCATTCTTGGAGAATTTCTTTCAAGAAGTAAATCATGGCATAAACAGCAGAATTCATTTAGATTTTTTGTAGGATGCGAGAACTCAAGGCGACCTCAAATACTTGAATCTTTTGAATATAAAATTACTAATTATTTGAGGTACTGCAATGGTGGACAGAAGGATGACTCGGCAATTATTGAGGTACTACCAAGAACTGATGCATTTGAATTAGTTTGCCACAAAGATATCAAGGAATTGTCAAATTTTGCTAGCATAGTGTGTTTGGAACGCATTCGCGGTCTTTTGATTAAAAAATGCAACAAAGTTTTGACTATTGTGTCTGGTGAAACAAGTAGCAATGCCATGAATGGAATGAAAATAGAAACAAGAGTCATCTTACCAAATTTGGAGCAACTTTATTTGGAAAACTTGCTCAATTTAAAATGTGCTTTTAGAGGTCCTTTGCACAGTGGAACCTTTTCCAAATTACAAACTGTGTCATTGAAAAATTGTCCAACACTGAGTGAAATCTTCAGTAATGGAGCAATTGAACATTTTTCAGAACTTCAGAAGCTGAAACTTGAAGATTGCTCAAAAATTGAAAAACTTATCACAGAAAACATTGAAAGAGAAAGGGATGTGCTTCCAAAACTAGAAATGCTTCTACTAGTTAACTTGCCTAAATTCAAAACTATTTGCTCAGTTCATACATCGGCTTGGTCCTCTTTGGAGCTGTTAAGGATACATAATTGTCCAGAGTTGAAAACTTTACCACTAGACAGTGGCAATGCAGTCAACTTAAAGTCCGTTAAAGGGCAGCAAGAGTGGTGGGCTGAGTTGGATTGGACAAACAATGAAGAGGTGTATCAAAGATTGCAACCCATATTTGTTGCCTCCAATGAGTATTTTTCTTAA 4836 0.3952 MALDANVAIEDVSSRGVSVDPTKRRHEVVKKVILNGKEGSLDDGFTWRKYGQKDILGAKFPRGTKVAMPKRKGRGRPKGSRVQKKVKESQDGELVIPNTPLNVVKADPDFIEEQEGGTSMPKKKGRGRPKGSQAQNCQESGHSNLNNRIHPSDMLEVGFDCEELEDADTVMPNRNGQEQSKGSGQFCQENADCENFYNNPSNIMEVSLRCKEEQETDTIVKPNKKKGRGQTRGLSLQMKRQQSADGKLDVIIHPTKLVAVGPGRNDFITDLSLIVRQNARLNVRQWKKVPQSTRDTIVQNILNNWRLPDTDMVRKAILHEAGRLYQNWRSRLRDYYLKFETKEEALKHVPDDINDSDWQFLVDYFSSPYFEIMSAKNKANKAKQRTKHTTGSKSFMAISYDARDPVTGMEPDMQTFWQLTHRKENGEWIDEASKEINDKVAEQINEKRCQIEEVGETNEEEIINTAFKTLVGKRSYMQGVGPFGAGLRSSSSSSSKIQQLQAELDAQKRETENARKECDEIRARLVMVESYLEDERQKRTEIEGHLLDRQNEMQEISCQVQTTIQAALSQYLPPKSEAETSTKNKRKIAELEAQLNEAEDVITDIRSELVNTVAVAFKIMSEIELVGPLVGDMRPLGVGTVYAKILSKFASSKNLEDNYGILVKDMEMLQAIKKDKEMEAQRNKHRDTTNAYKLWRNRVSDVTEEVQKLKVKYEENMLPWWLLQRRSSLSEEMEKKCNCVRELMKDECLRDFLVDKPPEPVLRELNVPQISGYPTLQGALDNILGLLKNNKVKVIGVCGTKGVGKTTIMRNLNNNEEVARLFEIVIFVKVTAENHKLQEKIAHRLILEKETNKEHSDDIARRIHKELEKKKYLLILDEVEDAINLEQLGIPRDNNNDSKVVIATRFPMVYKLNRVQRVIKVMELSPEEAWKMFRDTVHAFNPKIDSPDIQPTAKLVCKRCSRLPLLIYNIANSFKLKESASSWWAGLEDLKPWPELQTQGLEELYSCLKFCYDELNDKMKQKCFLYTSLYPADSKVYSDYLVECWAAQGLLGDINDKRSYQRARNCGIDILEHLANVSLLEKGEAMMYVNMNHCMRQLALHISSKDPECSFYLQDGDESENLSNSRAWQQARWVSLRQLLDLPTSQDCSMILTLLLRKNSKLTSLPESFFENMSSLLLLDLYSSMITQLPSSLSNLTGLRGLFLNRCELMESLSSEIGLLQFLEVLDIRDTKVTFIPLQIGCLTNLRCLRIPFIASEDNEAQNVHVISKLHRLEELTIQVISYEQWCNDAKNVLQHVASLENVTHLRCCFPSSIILGEFLSRSKSWHKQQNSFRFFVGCENSRRPQILESFEYKITNYLRYCNGGQKDDSAIIEVLPRTDAFELVCHKDIKELSNFASIVCLERIRGLLIKKCNKVLTIVSGETSSNAMNGMKIETRVILPNLEQLYLENLLNLKCAFRGPLHSGTFSKLQTVSLKNCPTLSEIFSNGAIEHFSELQKLKLEDCSKIEKLITENIERERDVLPKLEMLLLVNLPKFKTICSVHTSAWSSLELLRIHNCPELKTLPLDSGNAVNLKSVKGQQEWWAELDWTNNEEVYQRLQPIFVASNEYFS 1611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01606 1611 Coils Coil 490 524 - -
Spst3g01606 1611 PRINTS Disease resistance protein signature 1491 1507 - -
Spst3g01606 1611 PRINTS Disease resistance protein signature 866 880 - -
Spst3g01606 1611 PRINTS Disease resistance protein signature 794 809 - -
Spst3g01606 1611 PRINTS Disease resistance protein signature 960 974 - -
Spst3g01606 1611 Pfam Plant transposase (Ptta/En/Spm family) 356 476 IPR004252 -
Spst3g01606 1611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 761 1026 IPR027417 -
Spst3g01606 1611 SMART WRKY_cls 41 98 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01606 1611 MobiDBLite consensus disorder prediction 65 81 - -
Spst3g01606 1611 Coils Coil 692 712 - -
Spst3g01606 1611 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 675 1565 - -
Spst3g01606 1611 MobiDBLite consensus disorder prediction 112 150 - -
Spst3g01606 1611 Gene3D - 761 919 IPR027417 -
Spst3g01606 1611 Gene3D - 923 1016 IPR042197 -
Spst3g01606 1611 SUPERFAMILY L domain-like 1135 1578 - -
Spst3g01606 1611 Gene3D Ribonuclease Inhibitor 1107 1328 IPR032675 -
Spst3g01606 1611 Gene3D WRKY domain 26 97 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01606 1611 Pfam Leucine rich repeat 1153 1209 IPR001611 GO:0005515
Spst3g01606 1611 Coils Coil 581 608 - -
Spst3g01606 1611 Gene3D Ribonuclease Inhibitor 1383 1592 IPR032675 -
Spst3g01606 1611 Pfam NB-ARC domain 781 1014 IPR002182 GO:0043531
Spst3g01606 1611 MobiDBLite consensus disorder prediction 131 150 - -
Spst3g01606 1611 SUPERFAMILY WRKY DNA-binding domain 39 63 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01606 1611 ProSiteProfiles WRKY domain profile. 36 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01606 1611 MobiDBLite consensus disorder prediction 61 90 - -
Spst3g01606 1611 Pfam WRKY DNA -binding domain 42 62 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01606 1611 SMART AAA_5 791 926 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01606 Spst-Chr3 19454964 19471788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01606 36 96 WRKY Transcription Factor Family AT5G24110 44.262 3.14e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g01606 NB-ARC 7.2e-36 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01606 - K13459 gmx:102661619 1682.92