Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01586 ATGCCAAATGGTATGCACTTGCAAGACAAAGTTAAGGTCTTAAGGGCACTATATTTTATGGAGGTGACCAATCTTGTTGTAGTCTTGCCAGCAGTTTTGGCATTCTTTGCACTTTCTCTACATCTCATCAATAGAATGGTGAGACTCAGAAACCTGAATCTTCCTCCTGGAAGATTAGGGTGGCCTATTGTTGGAGAAACCTTTGAGTTTATGCGTGCAATGCTTGAGGACAACGTGTTAAGGTTCATACAAGAGAGAGCAGAGAAATATGACTCTAGGGTGTTCAAGACTTCAATGTTTGGAGATCCTATTATTGTGTTTTGCGGGCCAGCAGGGAACAAGTTCCTATTCAGCAATGAGAACAAGAATGTCCAAGTGTGGTGGCCTAGTTCGGTGAAGAAGCTGCTAAGGTTATCCCTTGTTACCAAGGTTGGTGATGAGGCAAAGATGGTGAGAAGGTTGCTCATGAACTTTCTGAATGCAGAAACACTCAGAAATTACTTGCCAAAAATGGATAGAATTGCTCAGCGCCATATAGACAAACATTGGAAAGGAAAGGAGCAGGTGTTTGTCTATTCCATTCTAAAACTATACACCTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTGACCAAATAGCAAAGCTTTCGTTAAAATTTGATGAATTTCTGAAAGGGATGATTGGCTTCCCCCTCAACATTCCTGGCACAAGGTTTCATCGTTCAATGAAAGCTGCAGATGCAATAAGGAAAGAAATCAAAATTATTCTAAAGAAAAGGAAAGTGGATTTGGAGGAGAAGAGGGCATCACCTACTCAAGACCTTCTATCGCACATGCTTGTTACATCTGACCCAAGTGGAAGGTTTATGCCCGAAATGGAGATTATTGATAACATACTTCTTCTACTTTTTGCAGGCCATGATACTTCTAGATCAGTGTTATCATCGCTCATGAAGTATCTTGGACAGTTGCCTCAAGTTTATGAGCATGTCTTGAAAGAACAACTTGAAATTAGTCAAGTGAAAGAGGCAGGACAGTTGTTGCAATGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTCATGAGGCTGTGTCCACCAGTGAGTGGTGCTTATAGAGAAGCTACAACGGATTTCACCTATGCTGATTATAACATCCCCAAAGGCTGGAAGTTGCATTGGATAACTGGTTCATCACACAAGGATCCAACACTCTTCTCAAATCCAGAAACTTTTGATGCTTCAAGGTTTGAAGGAGCAGGGCCTACACCCTTTTCATTTGTTCCATTTGGAGGTGGCCCCCGAATGTGTTTGGGGCAAGAATTTGCTAGACTAGAGATACTTGTGTTCATGCATAATATTGTGAAACGGTTCAAGTGGGAATTGGTGATTCCTGATGAAAAGTTAAAGTATGATCCCATGCTAGAACCAGTAAAAGGACTTGGAATTCGGCTTCAAGCTTCTAGTTACTAG 1497 0.4095 MPNGMHLQDKVKVLRALYFMEVTNLVVVLPAVLAFFALSLHLINRMVRLRNLNLPPGRLGWPIVGETFEFMRAMLEDNVLRFIQERAEKYDSRVFKTSMFGDPIIVFCGPAGNKFLFSNENKNVQVWWPSSVKKLLRLSLVTKVGDEAKMVRRLLMNFLNAETLRNYLPKMDRIAQRHIDKHWKGKEQVFVYSILKLYTFELACCLFLSIEDSDQIAKLSLKFDEFLKGMIGFPLNIPGTRFHRSMKAADAIRKEIKIILKKRKVDLEEKRASPTQDLLSHMLVTSDPSGRFMPEMEIIDNILLLLFAGHDTSRSVLSSLMKYLGQLPQVYEHVLKEQLEISQVKEAGQLLQWEDVQKMKYSWNVASEVMRLCPPVSGAYREATTDFTYADYNIPKGWKLHWITGSSHKDPTLFSNPETFDASRFEGAGPTPFSFVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWELVIPDEKLKYDPMLEPVKGLGIRLQASSY 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01586 498 Gene3D Cytochrome P450 43 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Spst3g01586 498 SUPERFAMILY Cytochrome P450 47 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 Pfam Cytochrome P450 55 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 CDD CYP90-like 86 493 - -
Spst3g01586 498 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01586 498 PANTHER CYTOCHROME P450 26 51 481 - -
Spst3g01586 498 FunFam Taxadiene 5-alpha hydroxylase 46 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01586 Spst-Chr3 19246600 19258528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01586 53 400 Cytochrome P450 AT5G36110 43.305 1.54e-100 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01586 - K20667 gmx:100808690 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01586 3 19246600 19258528 Spst3g01586 3 19246600 19258528 ECH