Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01579 ATGGAAAACATTGCCGCGCAGCTGAAGCGCGGCATCTCGCGGCAGTTCTCGTCGGGGTCGCTGCGGAGGAGCCTGAGCCGGCAGTTCACGCGGCAGGCGTCGCTGGATCCGCGGCGGAACAACCAGCGGTTCAACTTCGGGCGGCAGTCGTCTCTGGATCCGATTCGCCGGAGCCCTGAACACGAGGAAGCGGAGCTCACCGTGCCCGAGAACCTGGACTCCACCATGCAGCTGCTCTTCATGGCTTGCCGCGGCGACGACAAGGGAGTGGAGGATTTGCTTAACGAAGGGGTCGACGTCAACAGCATCGACCTCGACGGCCGCACTGCCCTCCACATCGCCGCCTGCGAAGGCCACATCGAAGTCGTCCGGCTCCTCCTCACCCGTAAGGCCAACATCGACGCTCGCGATCGCTGGGGCAGTACCGCGGCGGCTGATGCCAAATATTATGGAAATACAGAGATTTATTACATGTTGAAGGCTCGTGGAGCGAAAGTGCCGAAAACCAGGAAGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCGGAATATGAACTCAACCCGTTAGAGCTACAGGTTCGGAGGAGTGATGGTATTTCAAAGGGATCATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCAGTGAAAATACTTGACAAGGACAGTTATACAGATCCTGATACCATAAATGCTTTCAAACATGAGCTCACATTATTAGAAAGGGTGCGACATCCTAATGTGGTCCAGTTTGTTGGAGCTGTAACCCAAAATATACCTATGATGATTGTGCGCGAGTACCATGCTAAGGGTGACCTGGCAAGCTATCTTCAAAAGAAAGGGCGTTTGTCCCCATCAAAAGTTCTACATTTTGCTCTTGATGTTGCTAGGGGCATGAACTATCTTCATGAATGCAAACCCGAACCGGTTATTCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGGCAATGGAAGATATCTGGATTTGGCACTGTGAGATTTTCTTTAATCTCACCTGATGAAGCAAGCCTGATACAGCCTGACTCTAACGTTGATCTTTCAAGCTTGTACGTAGCACCGGAGCTTTACAAAGATGAAGTCTTTGATAGAAGTGTGGATGCATATTCTTTTGGTCTGATTATATATGAGATGATAGAGGGTTCACCTCCCTTCTATCCCAAGCCCCCGGAGGAGGCAGTGAAACTGATGTGCTTAGAGGGGAAAAGACCGGCATTCAAGATCAAAACAAAACACTGTCCTCCGGATTTGAAAGAGTTGATTGAGGAATGTTGGGATCCAACCCCTGTTGTCAGGCCAACATTTTCTCAGGTCATTGAAATAAATAATAGGCTACATGCCACGTGGCAAGAAAGACATCATATCAGGTTGCTTCCTCATCCAATTTGTGAGCTTCAAGTTGGTGTTGGTGTCCTGTTAGTAGCCATTGCAATTCGAACAAGATTAACCTGA 1485 0.4896 MENIAAQLKRGISRQFSSGSLRRSLSRQFTRQASLDPRRNNQRFNFGRQSSLDPIRRSPEHEEAELTVPENLDSTMQLLFMACRGDDKGVEDLLNEGVDVNSIDLDGRTALHIAACEGHIEVVRLLLTRKANIDARDRWGSTAAADAKYYGNTEIYYMLKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRRSDGISKGSYQVAKWNGTKVAVKILDKDSYTDPDTINAFKHELTLLERVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLASYLQKKGRLSPSKVLHFALDVARGMNYLHECKPEPVIHCDLKPKNILLDNGGQWKISGFGTVRFSLISPDEASLIQPDSNVDLSSLYVAPELYKDEVFDRSVDAYSFGLIIYEMIEGSPPFYPKPPEEAVKLMCLEGKRPAFKIKTKHCPPDLKELIEECWDPTPVVRPTFSQVIEINNRLHATWQERHHIRLLPHPICELQVGVGVLLVAIAIRTRLT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01579 494 FunFam Integrin-linked protein kinase family 270 468 - -
Spst3g01579 494 CDD STKc_MAP3K-like 200 452 - -
Spst3g01579 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Spst3g01579 494 Gene3D Transferase(Phosphotransferase) domain 1 270 469 - -
Spst3g01579 494 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 142 458 - -
Spst3g01579 494 Gene3D Phosphorylase Kinase; domain 1 188 269 - -
Spst3g01579 494 SUPERFAMILY Ankyrin repeat 75 175 IPR036770 -
Spst3g01579 494 Pfam Protein tyrosine and serine/threonine kinase 202 451 IPR001245 GO:0004672|GO:0006468
Spst3g01579 494 PRINTS Tyrosine kinase catalytic domain signature 424 446 IPR001245 GO:0004672|GO:0006468
Spst3g01579 494 PRINTS Tyrosine kinase catalytic domain signature 377 399 IPR001245 GO:0004672|GO:0006468
Spst3g01579 494 PRINTS Tyrosine kinase catalytic domain signature 266 279 IPR001245 GO:0004672|GO:0006468
Spst3g01579 494 PRINTS Tyrosine kinase catalytic domain signature 305 323 IPR001245 GO:0004672|GO:0006468
Spst3g01579 494 Pfam Ankyrin repeats (3 copies) 80 166 IPR002110 GO:0005515
Spst3g01579 494 ProSiteProfiles Protein kinase domain profile. 190 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01579 494 SMART serkin_6 194 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01579 494 MobiDBLite consensus disorder prediction 38 52 - -
Spst3g01579 494 FunFam serine/threonine-protein kinase STY46-like 187 270 - -
Spst3g01579 494 Gene3D - 31 185 IPR036770 -
Spst3g01579 494 SUPERFAMILY Protein kinase-like (PK-like) 201 451 IPR011009 -
Spst3g01579 494 MobiDBLite consensus disorder prediction 38 65 - -
Spst3g01579 494 SMART ANK_2a 74 102 IPR002110 GO:0005515
Spst3g01579 494 SMART ANK_2a 106 135 IPR002110 GO:0005515
Spst3g01579 494 FunFam Integrin-linked protein kinase 1 47 185 - -
Spst3g01579 494 ProSiteProfiles Ankyrin repeat region circular profile. 106 138 - -
Spst3g01579 494 PIRSF ILK 8 471 - -
Spst3g01579 494 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01579 Spst-Chr3 19122041 19128597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01579 1 450 MAP Kinase Kinase Kinase AT2G31800 76.275 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Spst3g01579 PK_Tyr_Ser-Thr 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01579 - - vum:124822479 837.795