LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst3g01579	ATGGAAAACATTGCCGCGCAGCTGAAGCGCGGCATCTCGCGGCAGTTCTCGTCGGGGTCGCTGCGGAGGAGCCTGAGCCGGCAGTTCACGCGGCAGGCGTCGCTGGATCCGCGGCGGAACAACCAGCGGTTCAACTTCGGGCGGCAGTCGTCTCTGGATCCGATTCGCCGGAGCCCTGAACACGAGGAAGCGGAGCTCACCGTGCCCGAGAACCTGGACTCCACCATGCAGCTGCTCTTCATGGCTTGCCGCGGCGACGACAAGGGAGTGGAGGATTTGCTTAACGAAGGGGTCGACGTCAACAGCATCGACCTCGACGGCCGCACTGCCCTCCACATCGCCGCCTGCGAAGGCCACATCGAAGTCGTCCGGCTCCTCCTCACCCGTAAGGCCAACATCGACGCTCGCGATCGCTGGGGCAGTACCGCGGCGGCTGATGCCAAATATTATGGAAATACAGAGATTTATTACATGTTGAAGGCTCGTGGAGCGAAAGTGCCGAAAACCAGGAAGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCGGAATATGAACTCAACCCGTTAGAGCTACAGGTTCGGAGGAGTGATGGTATTTCAAAGGGATCATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCAGTGAAAATACTTGACAAGGACAGTTATACAGATCCTGATACCATAAATGCTTTCAAACATGAGCTCACATTATTAGAAAGGGTGCGACATCCTAATGTGGTCCAGTTTGTTGGAGCTGTAACCCAAAATATACCTATGATGATTGTGCGCGAGTACCATGCTAAGGGTGACCTGGCAAGCTATCTTCAAAAGAAAGGGCGTTTGTCCCCATCAAAAGTTCTACATTTTGCTCTTGATGTTGCTAGGGGCATGAACTATCTTCATGAATGCAAACCCGAACCGGTTATTCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGGCAATGGAAGATATCTGGATTTGGCACTGTGAGATTTTCTTTAATCTCACCTGATGAAGCAAGCCTGATACAGCCTGACTCTAACGTTGATCTTTCAAGCTTGTACGTAGCACCGGAGCTTTACAAAGATGAAGTCTTTGATAGAAGTGTGGATGCATATTCTTTTGGTCTGATTATATATGAGATGATAGAGGGTTCACCTCCCTTCTATCCCAAGCCCCCGGAGGAGGCAGTGAAACTGATGTGCTTAGAGGGGAAAAGACCGGCATTCAAGATCAAAACAAAACACTGTCCTCCGGATTTGAAAGAGTTGATTGAGGAATGTTGGGATCCAACCCCTGTTGTCAGGCCAACATTTTCTCAGGTCATTGAAATAAATAATAGGCTACATGCCACGTGGCAAGAAAGACATCATATCAGGTTGCTTCCTCATCCAATTTGTGAGCTTCAAGTTGGTGTTGGTGTCCTGTTAGTAGCCATTGCAATTCGAACAAGATTAACCTGA	1485	0.4896	MENIAAQLKRGISRQFSSGSLRRSLSRQFTRQASLDPRRNNQRFNFGRQSSLDPIRRSPEHEEAELTVPENLDSTMQLLFMACRGDDKGVEDLLNEGVDVNSIDLDGRTALHIAACEGHIEVVRLLLTRKANIDARDRWGSTAAADAKYYGNTEIYYMLKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRRSDGISKGSYQVAKWNGTKVAVKILDKDSYTDPDTINAFKHELTLLERVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLASYLQKKGRLSPSKVLHFALDVARGMNYLHECKPEPVIHCDLKPKNILLDNGGQWKISGFGTVRFSLISPDEASLIQPDSNVDLSSLYVAPELYKDEVFDRSVDAYSFGLIIYEMIEGSPPFYPKPPEEAVKLMCLEGKRPAFKIKTKHCPPDLKELIEECWDPTPVVRPTFSQVIEINNRLHATWQERHHIRLLPHPICELQVGVGVLLVAIAIRTRLT	494

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Spst3g01579	494	FunFam	Integrin-linked protein kinase family	270	468	-	-
Spst3g01579	494	CDD	STKc_MAP3K-like	200	452	-	-
Spst3g01579	494	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	311	323	IPR008271	GO:0004672\|GO:0006468
Spst3g01579	494	Gene3D	Transferase(Phosphotransferase) domain 1	270	469	-	-
Spst3g01579	494	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	142	458	-	-
Spst3g01579	494	Gene3D	Phosphorylase Kinase; domain 1	188	269	-	-
Spst3g01579	494	SUPERFAMILY	Ankyrin repeat	75	175	IPR036770	-
Spst3g01579	494	Pfam	Protein tyrosine and serine/threonine kinase	202	451	IPR001245	GO:0004672\|GO:0006468
Spst3g01579	494	PRINTS	Tyrosine kinase catalytic domain signature	424	446	IPR001245	GO:0004672\|GO:0006468
Spst3g01579	494	PRINTS	Tyrosine kinase catalytic domain signature	377	399	IPR001245	GO:0004672\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst3g01579	Spst-Chr3	19122041	19128597	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst3g01579	1	450	MAP Kinase Kinase Kinase	AT2G31800	76.275	0.0	745

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-5	Spst3g01579		PK_Tyr_Ser-Thr	1.1e-50	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst3g01579	-		-	vum:124822479	837.795

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