Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01574 ATGGCAAATTCAAAGGGCTCATCGGGTTTCAAAAATTTTATGTATCCTGGAAAGCATGCTCTACTTCCTCCTAAAAGTCCGTTTCCTAGTGTTTCCCAAGCTTACGCTGATTATGTCCCAAATCCAACTATTGGTTTAAAGGGTGGCAACAGACCTAGAGAGGGAATCCCGCACCACCAACGTACATCATCTGAGAGCCTTGTTATAGAGGAGCAGCCTTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTTCGAAGAGGTGGACATCGGCGTTCATCAAGTGATTCTTTTGCGTATATAGACGCAGTGAATGCATCTAACATCAATTATGCTGATCAGGACGAGTATAAATATAAGAATTTGATGCCTATTCCGTCTTGGTTATCTCAAGACTTTGACCGCAGCAAAGATGCTCGTCATCTACCTGTTTATCAAGAAATGAGCTTAGCTAAACAGAAGAATAGGTCATGGGACTCTTTCTCAAATGCCATGACAAGTCCAGTTGGTGTTTCTTCTTCTGGCAAAGACAGTGCAGCTTTTCAGAGCTCAGGATTGCCATGTACACCACATGAAGCAGATGGGCTACAACCATCTGCAACTGAAAAGCACGATTCAGTAGAATCTGGCTTGCAGGATGCAAAATCATTTTCTGAAAAAAAGGACAATTCACATGCAAAGTTATCTGCCTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAGCGTTCACGGGTCCGGAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCAGAAGGGTCTGAAGTCTCGGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAATCAACGTTTAGAAAATATAGCACAAGAACAGCTTATCAAATATTTGGAGCAGGAAGTGCTGGAAAGAGAGATTGGAAGATTACGTGCATTATATCAGCAGCAGCAACAACAGCCACCAACTAAGCAACAACAGCAACCATCTGGTAGTCACAGACGCTCGAACAGCAGAGACCTCGAATCTCAGTTTGCAAACCTTTCTCTAAAACACAAGGACACCACCAATTCAGGGCAAGACCCTGCTCTCAGAATTTAG 1137 0.4301 MANSKGSSGFKNFMYPGKHALLPPKSPFPSVSQAYADYVPNPTIGLKGGNRPREGIPHHQRTSSESLVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDAVNASNINYADQDEYKYKNLMPIPSWLSQDFDRSKDARHLPVYQEMSLAKQKNRSWDSFSNAMTSPVGVSSSGKDSAAFQSSGLPCTPHEADGLQPSATEKHDSVESGLQDAKSFSEKKDNSHAKLSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALNQRLENIAQEQLIKYLEQEVLEREIGRLRALYQQQQQQPPTKQQQQPSGSHRRSNSRDLESQFANLSLKHKDTTNSGQDPALRI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01574 378 MobiDBLite consensus disorder prediction 353 378 - -
Spst3g01574 378 MobiDBLite consensus disorder prediction 199 243 - -
Spst3g01574 378 MobiDBLite consensus disorder prediction 152 187 - -
Spst3g01574 378 MobiDBLite consensus disorder prediction 327 378 - -
Spst3g01574 378 MobiDBLite consensus disorder prediction 327 346 - -
Spst3g01574 378 MobiDBLite consensus disorder prediction 43 68 - -
Spst3g01574 378 MobiDBLite consensus disorder prediction 148 245 - -
Spst3g01574 378 SUPERFAMILY Leucine zipper domain 245 287 IPR046347 GO:0003700|GO:0006355
Spst3g01574 378 Coils Coil 249 304 - -
Spst3g01574 378 Coils Coil 312 332 - -
Spst3g01574 378 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 362 IPR044797 -
Spst3g01574 378 Gene3D - 235 291 - -
Spst3g01574 378 CDD bZIP_plant_RF2 236 284 IPR044759 GO:0003700|GO:0006355
Spst3g01574 378 SMART brlzneu 234 293 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01574 Spst-Chr3 19076260 19080213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01574 71 308 bZIP Transcription Factor Family AT2G42380 30.328 2.41e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01574 - - gmx:100813098 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01574 3 19076260 19080213 Spst3g01574 3 19076260 19080213 ECH