Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01573 ATGGGTAAGAGTCCCTTTTCCTTCCGCCGCCCCGCCTCTCGCCGGCGCCCTAAAAAGACTGCTGCGCCGCCCCCTCCTCCGTCTCCGCCGCAGCCGCCCTACGCGGCTGGGGTCACTGCCTCGCCAGAAACAGCCGCTGCGGGCGTCGGCGCCTTGACCAAGGTGAAGAAGAAGACTGGCGGCGCCCGGCTCTGGATGAGGTTCGACCGGTCTGGCCGGTCCGAGCTCGTGGAGTGGGAGAAGAACGCTATCATCCACCACGCCGGGATTCCTGCTCGAGACCTGAGAATTCTGGGGCCTGTCTTCTCCCACTCCTCGAACATCCTCGCTAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTCATAAAGGCTATAGTGACGGCTGAAGAAGTGTTATTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAGCTCCGGCAACAGCTTCCGGGCAAGAGTCAACCGAAACTTCTCGGCGCCGTGGAGGAGCAGGAAGGTGAAATGCAGGGTTCTAATGGCAGACAATGGTTGCCTACGCCGGAGATGGCCGAAGGTTTGCAGTCTGAGCTTCCGTTTGAGTTTCAAGTTCTGGAGATTGCTTTGGAGGCTGTGTGTACTTATCTAGACTCCAGTGTGGCAGACCTTGAGAGAGGTGCTTACCCTGTGTTGGATGAATTGGCTAGGAATGTTAGCACCAAGAATCTTGAACATGTGAGAAGTTTGAAGAGTAATCTCACGCGGTTGCTGGCACGAGTGCAGAAGGTACGAGATGAAATTGAACATTTGTTAGATGACAACGAAGATATGGCACAACTATATTTAACAAGGAAGTGGTTGCTGAATCAACAATTTGATGAGGCTCAATTGGGTGCCACAACCTCAAATAACCTTCCTAATTCCGCACGTTCTGTTCGACAACTCAGTTCCAACAGAAGTGAAAGTCTTGTGACTAGCCATTATGGGGATGATAATGATGTTGAGGACTTGGAGATGTTGCTTGATGCATATTTCATGCAGTTAGATGGCACTCGTAACAAGATATTATCTGTCAGAGAGTATATTGACGACACTGAAGACTATGTCAACATCCAACTGGATAACCACCGAAATGAACTTATTCAGCTGCAGTTGACATTGACTATTGCATCATTTGCTATTGCTATTGAGACTTTGATTGCTGGTGTATTTGGTATGAACATTCCTTGTAAATTATATAGTATAGATGGAATATTTTGGCCCTTTGTTTGGATCACGTCTGCAGCTTGTGTATTGCTTTTCTTCCTTATTTTAGCGTATGCAAGATGGAAAAAATTGCTGGGATCATAA 1335 0.4861 MGKSPFSFRRPASRRRPKKTAAPPPPPSPPQPPYAAGVTASPETAAAGVGALTKVKKKTGGARLWMRFDRSGRSELVEWEKNAIIHHAGIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPGKSQPKLLGAVEEQEGEMQGSNGRQWLPTPEMAEGLQSELPFEFQVLEIALEAVCTYLDSSVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLLNQQFDEAQLGATTSNNLPNSARSVRQLSSNRSESLVTSHYGDDNDVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGVFGMNIPCKLYSIDGIFWPFVWITSAACVLLFFLILAYARWKKLLGS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01573 444 Coils Coil 241 275 - -
Spst3g01573 444 MobiDBLite consensus disorder prediction 18 36 - -
Spst3g01573 444 Gene3D Magnesium transport protein CorA, transmembrane region 138 375 - -
Spst3g01573 444 Pfam CorA-like Mg2+ transporter protein 323 437 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Spst3g01573 444 CDD Mrs2_Mfm1p-like 65 441 IPR039204 -
Spst3g01573 444 Gene3D Magnesium transport protein CorA, transmembrane region 382 442 - -
Spst3g01573 444 Gene3D - 51 136 - -
Spst3g01573 444 FunFam Magnesium transporter MRS2-1 53 136 - -
Spst3g01573 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 42 442 IPR039204 -
Spst3g01573 444 MobiDBLite consensus disorder prediction 1 40 - -
Spst3g01573 444 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 432 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01573 Spst-Chr3 19066521 19069199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01573 1 444 MRS2 Gene Family AT3G58970 66.667 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01573 K16075 - gmx:100812561 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01573 3 19066521 19069199 Spst1g01933 1 27576575 27578088 PCT