Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01571 ATGCCTTTTATAGCACCTGATGATCTGGATTATCTGGCACCTGCTATATTTTGTAGGAATACTTGCTTTGTAGCAGTAAAAAAATTCAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGACGATTACGTAATTATTGGATCAGCAAATATTAACCAGAGATCATTAGATGGCTCGAGGGACACAGAAATAGCTATGGGAGCTTATCAACCAAAATATACATGGACAGAACAGAAACCACATCCACATGGCCAGGTGTATGGATACAGAATGTCACTGTGGGCTGAGCACCTTGGTAGTCTTGATCATGTTTTTGATGAACCTCAGAGCCTGGAATGTGTTAGACAAGTCAACAAAATTGCAAAACAAAACTGGGGCACGTATGTATCAGATGAAATGAATTACATGAGAGGACATTTGATGCAGTATCCAGTTAAGATCAGCAGGGATGGAAAAGTCAGTGCACTGGATGATTATGAGTCCTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACCAAATTCACTTCCGGATTCACTAACCACCTGA 561 0.3975 MPFIAPDDLDYLAPAIFCRNTCFVAVKKFRRFMIYVHAKGMIVDDDYVIIGSANINQRSLDGSRDTEIAMGAYQPKYTWTEQKPHPHGQVYGYRMSLWAEHLGSLDHVFDEPQSLECVRQVNKIAKQNWGTYVSDEMNYMRGHLMQYPVKISRDGKVSALDDYESFPDVGGKILGSPNSLPDSLTT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01571 186 Pfam Phospholipase D C terminal 106 176 IPR024632 -
Spst3g01571 186 SMART pld_4 32 59 IPR001736 GO:0003824
Spst3g01571 186 PANTHER PHOSPHOLIPASE D 27 175 IPR015679 -
Spst3g01571 186 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 32 59 IPR001736 GO:0003824
Spst3g01571 186 SUPERFAMILY Phospholipase D/nuclease 19 117 - -
Spst3g01571 186 Pfam Phospholipase D Active site motif 33 59 IPR001736 GO:0003824
Spst3g01571 186 Gene3D Endonuclease Chain A 16 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01571 Spst-Chr3 19062640 19063535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01571 28 185 Phospholipase D Gene Family (Wang group) AT4G11850 60.759 2.18e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01571 K01115 - pvu:PHAVU_002G2487001 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01571 3 19062640 19063535 Spst3g01571 3 19062640 19063535 ECH