Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01566 ATGGAGAAGTACGAGGTGGTGAAAGAGAGCATAGGTTATGGAAGATACGCAATGGTGAGGCTTATGCGTCACAGAGAGACCAAAGACCTCGTTGCTGTCAAATTCATCCCCCGACACTACATGATTGAGGAGAGTGTGGACAGGGAAATCATGAACCATAGATGTCTTCGTCATCCCAATATTGTTCAGTTCATAGAGGTGGCTTTGACTCCAACACATCTTGCAATAGTTATGGAGTATGCAGCGGGTGGAGAGTTGTTTAATCAAGTTTTTGGAAGAAGAATGCAAGAAGATAAAGCTCGACATTTCTTCCAACAGTTGATTGCAGGAGTTAGTTATTGCCACAACATGGAAATATGTCATCGAGACTTGAAGTTGGAGAATACCTTATTGGATGGAAGCTCTGCAAATCGTCTTAAAATCTGTGATTTTGGCTATTCTAAGTCATATATACTTCATTCGCGAACTCATTCAAAGTTAGGAACTCCAGCATATATTGCACCAGAGATCCTTTCTGGGAAAGGTTATGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTAATACTTTATACAATACTTGTAGGAACATTGCCATTTATGGACAAAGAGGACCAACAAAATATCCAGAAAATCGTTCAACGAGTTGTGGCTGTTCAATACGAGTTCCCCAACAATGTTTTATCTCAAGATAGTAAAAATCTGATATCTCGTATTTTTGTGGCAGATCCAGAAAAGAGAATCACCATGAAGGAAATCAAGTCACATCCATGGTTTTTGAAGAACTTACCTGAGGAATTGAGAGAAGAGGTTCAAGATGTCTACTGCAATGAAGAAAATACAGAACATTCTCTTCAAAGTATAGAAGAGATCATGAAAATTGTAAACGAAGCCAAAACCACACCTGTAGCTTTGGCAGGGGAATAG 927 0.397 MEKYEVVKESIGYGRYAMVRLMRHRETKDLVAVKFIPRHYMIEESVDREIMNHRCLRHPNIVQFIEVALTPTHLAIVMEYAAGGELFNQVFGRRMQEDKARHFFQQLIAGVSYCHNMEICHRDLKLENTLLDGSSANRLKICDFGYSKSYILHSRTHSKLGTPAYIAPEILSGKGYDGKLADVWSCGVILYTILVGTLPFMDKEDQQNIQKIVQRVVAVQYEFPNNVLSQDSKNLISRIFVADPEKRITMKEIKSHPWFLKNLPEELREEVQDVYCNEENTEHSLQSIEEIMKIVNEAKTTPVALAGE 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01566 308 Gene3D Transferase(Phosphotransferase) domain 1 1 305 - -
Spst3g01566 308 ProSiteProfiles Protein kinase domain profile. 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01566 308 SMART serkin_6 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01566 308 FunFam Serine/threonine-protein kinase SRK2A 81 267 - -
Spst3g01566 308 SUPERFAMILY Protein kinase-like (PK-like) 7 284 IPR011009 -
Spst3g01566 308 PANTHER SERINE/THREONINE KINASE 2 286 - -
Spst3g01566 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Spst3g01566 308 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Spst3g01566 308 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01566 Spst-Chr3 19009839 19013629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01566 1 263 CBL-interacting serine-threonine protein kinases AT2G25090 42.652 4.18e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Spst3g01566 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01566 K14498 - gmx:100787825 466.848