Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01547 ATGGCCCTGGGAAGAGTCAGTGCAATTATCTCTCTGATGCTGTCATTTTGGTTGGTGCTTCACTGTGAGATGGCTCACTCAGCCACCTACACTGTTGGAGATGGAAATGGTTGGACCTTTAACACTGTGGCTTGGCCTAAAGGGAAACGCTTCAGGGCTGGTGATACACTTGTTTTCAACTACAGCCCTGGGACTCACAATGTGGTGGCTGTAGACAAAGCTGGTTACAAGGCATGCAAGACCCCAAAAGGAGCCAAAACCTATAATTCAGGAAGTGATCAGATCAAGCTTGTCAAGGGACAAAACTACTTCATCTGCAATTTCGTTGGTCACTGCGAATCTGGCACCAAAGTCGCCATTAATGCTCTCTGA 372 0.4731 MALGRVSAIISLMLSFWLVLHCEMAHSATYTVGDGNGWTFNTVAWPKGKRFRAGDTLVFNYSPGTHNVVAVDKAGYKACKTPKGAKTYNSGSDQIKLVKGQNYFICNFVGHCESGTKVAINAL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01547 123 Pfam Plastocyanin-like domain 38 115 IPR003245 GO:0009055
Spst3g01547 123 SUPERFAMILY Cupredoxins 28 122 IPR008972 -
Spst3g01547 123 ProSiteProfiles Phytocyanin domain profile. 28 123 IPR003245 GO:0009055
Spst3g01547 123 PANTHER BLUE COPPER PROTEIN 27 121 IPR039391 GO:0009055
Spst3g01547 123 FunFam basic blue protein-like 28 122 - -
Spst3g01547 123 Gene3D - 28 122 IPR008972 -
Spst3g01547 123 CDD Plantacyanin 28 122 IPR041844 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01547 Spst-Chr3 18869621 18870287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01547 18 123 Miscellaneous Gene Families AT5G26330 37.168 1.02e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01547 - - gmx:100499869 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01547 3 18869621 18870287 Spst3g01547 3 18869621 18870287 ECH
Spst6g01772 6 16912120 16920013 Spst3g01547 3 18869621 18870287 PCT