Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01541 ATGGATTTTTTCATGCAATATTTGTTCCTTACTTTGATTACCATGATTGCATCTGTCTATGTTTTGCAGAAAAGAGGCACTAAAACCTTGCCTCCTGGGAGCTTTGGGTGGCCCCTGGTGGGTGAAACCTACCAATTTTTGTTCATCAAGATTGAACATTTCATTCAAGAGAGGGTGAACAAGTACTCCTCAGAGATCTTCCGCACATCCATTCTAGGAGAGCCAACAGTGGTTCTTTGTGGTCCTGGAGCAAACAAATTTGTCTCCACCAATGAGACAAAGCTTGTGGAAGTTTGGTACATGAAGACTCAGCGCAGGTTGTTCAATATTCCTGATCGAACTCATGGAGCAAAGCCAAAACCAAAACCAAAGCAAGAAGCTGCATCTGCTGCTCCAGTGAAGAGCTTGGGGATTCTGAAACCTGAGGGAATAGCAAGGTACATGGGGAACATGATTGAATCAACCATTCATCAGCATTTCATGACACACTGGGCAGGAAAAACAGAAGTGAAGGTTTACCCTTTGGTGAAGGCCTTTTCCCTCACTCTGGTGTGTCAATTCTTCTTAGGCTTAGATAAACCAATATTGGCCACTGAGTTTGACAACTTACATTCTGGGATCTACTCTGTTCCCGTGAATTTCCCAGGCTCCACATACCGTAGGGCACTGAAGGCTGCAGCTGCAATAAGAGAAGAGATCCAATTTCAGATAAAAGAGAAGATTGATGCTTTCTCCAAGGGGCAAGTTGTAGATGACCTACTAGCACACGTAGTTGGTTCTGAGCAGGGTGGAAAATATGTGCCAAAAATGGCAATAAGCAACATCATCATGGGGTTGATGAATTCCAGCTACATACCAATAGCTATTAATCTGGCTTTCATGATCAAACACATTGGACAAAGGCCTGATATCTACCAAAAAATCGTATCCGAGCATGCTGATGTTACAAAATCCAAAGGATCTGGTACAGCACTAGATTGGGACAGCATGCAGAAACTGAAATACACATGGGCTGTTGCACAGGAGACCATGAGACTCTATCCAACTGCACCCGGTGTATTCAGAGAGGTGTTAACAGACATCACCTATGAAGGTTATACTATTCCAAAGGGGTGGAAGATCTTTTGGGCACTTGTTGGGACAAATAAGAATCCCAACTACTTTCCTGAACCTGAAAGTTTTGATCCCTCAAGATTTGAAGGGAATAATTTTCCTGCTCCATACACTTGGATACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGAAAGGACTACGTACGGTTTGTGGTCCTCAGTTTCATTCACGTTCTTGTAAGCAAGTTCAAGTGGGAAGCTATTCTTCCTGATGAGAAAGTTTCAGGTGTTCTAATACCTACCCCGACAGAGGGAATTCCTATCCGTCTTCATCCCCATTAA 1416 0.4357 MDFFMQYLFLTLITMIASVYVLQKRGTKTLPPGSFGWPLVGETYQFLFIKIEHFIQERVNKYSSEIFRTSILGEPTVVLCGPGANKFVSTNETKLVEVWYMKTQRRLFNIPDRTHGAKPKPKPKQEAASAAPVKSLGILKPEGIARYMGNMIESTIHQHFMTHWAGKTEVKVYPLVKAFSLTLVCQFFLGLDKPILATEFDNLHSGIYSVPVNFPGSTYRRALKAAAAIREEIQFQIKEKIDAFSKGQVVDDLLAHVVGSEQGGKYVPKMAISNIIMGLMNSSYIPIAINLAFMIKHIGQRPDIYQKIVSEHADVTKSKGSGTALDWDSMQKLKYTWAVAQETMRLYPTAPGVFREVLTDITYEGYTIPKGWKIFWALVGTNKNPNYFPEPESFDPSRFEGNNFPAPYTWIPFGAGPRSCPGKDYVRFVVLSFIHVLVSKFKWEAILPDEKVSGVLIPTPTEGIPIRLHPH 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01541 471 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 Pfam Cytochrome P450 31 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 MobiDBLite consensus disorder prediction 111 130 - -
Spst3g01541 471 PANTHER CYTOCHROME P450 26 28 448 - -
Spst3g01541 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Spst3g01541 471 Gene3D Cytochrome P450 21 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 SUPERFAMILY Cytochrome P450 28 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 CDD CYP90-like 58 470 - -
Spst3g01541 471 PRINTS P450 superfamily signature 300 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01541 471 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01541 Spst-Chr3 18832182 18834079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01541 29 374 Cytochrome P450 AT5G36110 31.856 1.49e-63 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01541 K20667 - gmx:100782971 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01541 3 18832182 18834079 Spst3g01541 3 18832182 18834079 ECH