Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01538 ATGGCTTTGTCTTCTCAACTACTTGTTCATCTTGCCTTCTTACTCAGCCTCCTCCAGCTTCAGTTACACTACCTTTTGGTTGGTGTATCATCAGCCACTTTAAGCATCACCACAGACACAGAAGCCTTGATCTCATTCAAGTCTCAACTGACAAATGACACTCTTAATCCCCTTTCTTCTTGGAACCATAATTCATCCCCCTGCAATTGGACTGGTGTCCAATGTGACAGGCTTGGCCAAAGAGTTACAGGCTTGGATCTTTCAGGCTTGAAACTCTCAGGTCACTTAAGTCCTTATATTGGTAATCTCTCCTCTCTCAAGTCCCTCCATTTGCAGAATAACCAACTTAGAGGAGTGATTCCTGACCAAATTGGCAACCTATTCAGTTTGAGAGTTCTAAATATGAGCTCTAACATGTTAGAAGGAAAGCTTCCTTCAAACATCACCCACTTGAATGAGCTCCAGATTCTTGATTTGTCCTCAAACAAGTTTGTCAGCAAGATTCCTGAAGATATCAGCAGCTTAAAAAGGCTTGAGGTTTTGAAGCTGGGAAGGAATAGCCTCTATGGTGAAATCCCAGCATCTCTGGGAAATATTTCTTCCCTCAAAAATATAAGTTTTGGCACCAACTCTCTCACTGGCTGGATTCCCAGTGACTTGGGTAGGCTGCATGATTTGATTGAGCTTGATCTCACTCTTAACAATCTCAATGGGTCTGTTCCACCTGTTATATACAACTTATCTTCCCTTGTTAACTTCGCCTTAGCTTCAAACTCTTTGTGGGGTGAGATTCCTCAGGATGTCGGTCACAAACTTCCAAAACTTATAGTATTCAATATCTGCTTCAATTATTTCACAGGTGGAATTCCAGGGTCTCTGCACAACCTCACCAACATTCAGGTCATTCGCATGGCTTCCAACTTTTTGAAAGGAGCGGTCCCACCTGGTTTAGGAAATCTCCCATTTCTTCGCATGTATAATATTGGGTTTAACAAGATAGTGAGTTCAGATGTCAGAGGTTTAGACTTCATTACTTCTTTGACAAACAGTACTCACCTCAACTTTCTAGCAATTGATGGAAATATGCTGGAAGGTGTGATTCCAGAAACTATTGGCAATCTCTCCAAGGATCTGTCAACATTATACATGGGACAGAATCGTTTAAATGGAAGCATACCCCCCTCCATTGGTCGTCTTAGTGGCTTGAAGTTGTTAAACTTAGGCTACAATTCATTCTCTGGAGAAATCCCACATGAGTTAGGCCAGTTAGCGGAACTACAAGAACTAACTCTGGCTGGAAATGAGATATCAGGGGTTATTCCAGATTCCCTAGGTAATCTCCTCAAGTTAAACCTGATTGACTTGTCAGGAAACAGGCTTGTGGGGAGGATACCTACCAGTTTTGGGAATTTTCAAAGTCTTCTTTACATGGACTTATCAAGCAACCGACTCAATGGAAGCATTCCTATGGAAATCCTCAATCTCCCAAGTTTGAGCAATGTTTTGAACTTGTCAATGAACTATTTGAGTGGATCAATACCTCAAATTGGGAAATTGAGTGGTGTTACCTCCATTGACTTTTCTAGCAACCAATTGTATGGTGGCATCCCCAGCTCATTCGGCAATTGTCTCAGCTTGGAAAATTTGTTTTTGACCAGGAATCAGCTTTCAGGTTCCATTCCAAAGGTTCTTGGAGAACTGAGAGGCTTGGAAACTTTGGACCTATCATCCAACCAACTCTCTGGAACCATTCCTGTTGAACTTCAAAATTTACAGGTGCTTAAGCTCTTAAACCTCGCGTACAATGATTTAGAAGGAGTCATTCCTAGTGGTGGAGTTTTCCAAAATCTCTCTGCCGTCCATTTAGAAGGCAATGAAAACCTCTGCTCGCAACTCCCATGTGGAAATCGTAGCCAAGGAAGAAAAAATACAAGACATTACGTCATCATAGCCGTTGTAGTAGCATTGGTACTGTGTCTCACAATTGGCTCACTATTATATATAAAGAGCAGAAAGGTAAAGGTAGCAGCAGCAGCATCTGAACAGATAAAACCTCTTGCACCAATGATCTCTTATGATGAGCTTCGTTTGGCAACTGAGGAGTTCAATCAGGAAAACTTATTGGGAGTTGGGAGCTTTGGCTCAGTTTACAAAGGCAATCTAAGTCACGGAACTACTATTGCAGTAAAAGTTCTTGACACCAGAAGAACAGGCTCTTTAAGGAGTTTCTTTGCAGAATGTGAGGCTATGAAGAACTCAAGGCATAGAAATCTGGTTAGGCTCATCACATCATGCTCTAGTGTTGACTTCAAAAACAATGATTTTCGGGCACTGGTGTATGAGTATCTGTGTAATGGTAGCTTGGAAGATTGGATTAAAGGGAGGAGAAAACATGCAAACGGAAATGGGTTGAACCTTATGGAGAGACTGAATATAGCAATAGATGTTGCATGTGCATTGGATTACCTGCACAATGACAGTGAAACCCCAGTTGTGCACTGTGATTTGAAGCCTAGCAACATTCTACTGGACGCAGACATGACAGCAAAGGTTGGAGACTTTGGATTGGCTAGGTTGCTTATTCAGAGATCAACTAACGAAGCTTCCATTAGCTTCACTCATCTCCTTAGGGGCTCTATTGGTTACATACCTCCAGAATATGGATGGGGAGAGAAAGCATGTGCAGCTGGAGATGTATATAGTTTTGGTATAGTGTTAATGGAGCTCTTATCTGGGAAAAGCCCTACAGATGAGTGTTTCACAGGAGGCCTAAGCATAAGAAGATGGATGCATTCAGCATTGAAAGACAAGACAGTGGAAGCCATTGACCCTCAGTTGGTGAACCTCATTTTGCATGATGACCCTTCAGAAGGACCAAATAACCTACAAGTGTGTTGTGTGGATGCAATAATAGGAGTAGCCATATCTTGCACTGCAGACAACCCATATGAACGCATTGGCATTAGAGATGCTGTTGGCCAACTGAAAGCTACAAGAGACACTCTTCTGAAGCAGTCTGATGAGAGTCATACTACACCTACTACTGGACATACCAAGTCTTACTTCCTTGTTTCAGTAAAGTGA 3084 0.4206 MALSSQLLVHLAFLLSLLQLQLHYLLVGVSSATLSITTDTEALISFKSQLTNDTLNPLSSWNHNSSPCNWTGVQCDRLGQRVTGLDLSGLKLSGHLSPYIGNLSSLKSLHLQNNQLRGVIPDQIGNLFSLRVLNMSSNMLEGKLPSNITHLNELQILDLSSNKFVSKIPEDISSLKRLEVLKLGRNSLYGEIPASLGNISSLKNISFGTNSLTGWIPSDLGRLHDLIELDLTLNNLNGSVPPVIYNLSSLVNFALASNSLWGEIPQDVGHKLPKLIVFNICFNYFTGGIPGSLHNLTNIQVIRMASNFLKGAVPPGLGNLPFLRMYNIGFNKIVSSDVRGLDFITSLTNSTHLNFLAIDGNMLEGVIPETIGNLSKDLSTLYMGQNRLNGSIPPSIGRLSGLKLLNLGYNSFSGEIPHELGQLAELQELTLAGNEISGVIPDSLGNLLKLNLIDLSGNRLVGRIPTSFGNFQSLLYMDLSSNRLNGSIPMEILNLPSLSNVLNLSMNYLSGSIPQIGKLSGVTSIDFSSNQLYGGIPSSFGNCLSLENLFLTRNQLSGSIPKVLGELRGLETLDLSSNQLSGTIPVELQNLQVLKLLNLAYNDLEGVIPSGGVFQNLSAVHLEGNENLCSQLPCGNRSQGRKNTRHYVIIAVVVALVLCLTIGSLLYIKSRKVKVAAAASEQIKPLAPMISYDELRLATEEFNQENLLGVGSFGSVYKGNLSHGTTIAVKVLDTRRTGSLRSFFAECEAMKNSRHRNLVRLITSCSSVDFKNNDFRALVYEYLCNGSLEDWIKGRRKHANGNGLNLMERLNIAIDVACALDYLHNDSETPVVHCDLKPSNILLDADMTAKVGDFGLARLLIQRSTNEASISFTHLLRGSIGYIPPEYGWGEKACAAGDVYSFGIVLMELLSGKSPTDECFTGGLSIRRWMHSALKDKTVEAIDPQLVNLILHDDPSEGPNNLQVCCVDAIIGVAISCTADNPYERIGIRDAVGQLKATRDTLLKQSDESHTTPTTGHTKSYFLVSVK 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01538 1027 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 233 340 - -
Spst3g01538 1027 CDD STKc_IRAK 708 985 - -
Spst3g01538 1027 SUPERFAMILY L domain-like 378 630 - -
Spst3g01538 1027 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 783 1008 - -
Spst3g01538 1027 Gene3D Phosphorylase Kinase; domain 1 673 782 - -
Spst3g01538 1027 Pfam Leucine rich repeat 378 436 IPR001611 GO:0005515
Spst3g01538 1027 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Spst3g01538 1027 Pfam Leucine rich repeat 521 580 IPR001611 GO:0005515
Spst3g01538 1027 FunFam Receptor protein kinase CLAVATA1 35 193 - -
Spst3g01538 1027 ProSiteProfiles Protein kinase domain profile. 702 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01538 1027 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Spst3g01538 1027 Gene3D Transferase(Phosphotransferase) domain 1 783 1018 - -
Spst3g01538 1027 SMART serkin_6 702 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01538 1027 Pfam Protein kinase domain 703 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01538 1027 Gene3D Ribonuclease Inhibitor 337 638 IPR032675 -
Spst3g01538 1027 SMART LRR_typ_2 151 175 IPR003591 -
Spst3g01538 1027 SMART LRR_typ_2 447 470 IPR003591 -
Spst3g01538 1027 SMART LRR_typ_2 223 247 IPR003591 -
Spst3g01538 1027 SMART LRR_typ_2 127 150 IPR003591 -
Spst3g01538 1027 SMART LRR_typ_2 103 126 IPR003591 -
Spst3g01538 1027 SMART LRR_typ_2 591 616 IPR003591 -
Spst3g01538 1027 SMART LRR_typ_2 423 446 IPR003591 -
Spst3g01538 1027 SMART LRR_typ_2 567 590 IPR003591 -
Spst3g01538 1027 ProSiteProfiles Leucine-rich repeat profile. 569 592 IPR001611 GO:0005515
Spst3g01538 1027 PRINTS Leucine-rich repeat signature 567 580 - -
Spst3g01538 1027 PRINTS Leucine-rich repeat signature 474 487 - -
Spst3g01538 1027 FunFam Inactive leucine-rich repeat receptor-like protein kinase 345 638 - -
Spst3g01538 1027 Gene3D Ribonuclease Inhibitor 96 336 IPR032675 -
Spst3g01538 1027 Gene3D Ribonuclease Inhibitor 34 95 IPR032675 -
Spst3g01538 1027 FunFam LRR receptor-like serine/threonine-protein kinase EFR 673 782 - -
Spst3g01538 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Spst3g01538 1027 SUPERFAMILY Protein kinase-like (PK-like) 685 995 IPR011009 -
Spst3g01538 1027 ProSitePatterns Protein kinases ATP-binding region signature. 708 730 IPR017441 GO:0005524
Spst3g01538 1027 SUPERFAMILY L domain-like 37 333 - -
Spst3g01538 1027 PANTHER OS04G0122200 PROTEIN 221 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01538 Spst-Chr3 18796242 18799415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01538 9 1013 Receptor kinase-like Gene Family AT5G20480 40.388 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst3g01538 Pkinase 9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01538 - - gmx:102664710 1644.02