Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01529 ATGACTGTAAAAACAGTGGAGCAGCAAAAAGCTTCCCCGTCCACACTGCACCACCACACGCTCATTAGTGATTGCTCAGTAACTTGTCAAAGCTTAAACAATGCTCCAAACAAATCCTTGCCACGTCACAACCCCTCCTCCTCCGCTCCTCAATTCGTCATCATCCTCACAAACACCAACACTCCGCACGTGCCCAAACACCCCCCTCGCACGTGCCCTGCTATGTTAACTCACCTCCTTTGTACGTCTTCACAGCATAAATACAACGCAACTACCTTCTCCTGTATCGCTTCCTCTCTCTATTTCTGGCCCAACCCGTTCTTCCTCTCCTCTCCTCTTATTGCTCTCAAAGCCTACCATCCACAACTTTTATTGTTCTTTCAATTTACCGTTTCAATTTCCAACCTTCTTTCTCTTTCTCTTTCCTGTTCAACTACTACCATGGTAGAGTGTGGTGGTGGTGAACGTCATTCCGAGGCCAGTTTCGAGACTGTCAATTCTTCCTTGCTTGGAAGCTCCATGAGCAGCGAGAGCATTTGCAGCACCAGTTTCAGCCGTCTCTCCTTCGATCTCCTCCCGCCCTCGCCGGAGACTCTCTCCCTCAAGCCTCACCGCTCCTCCGACTTTGCCTACTCCGCCATCCGCTCCGCCACCTTCCGTCGTAAGGCTGCCCTCACCTTCCGTGACTTCCACCTCCTCCGCCGCATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCGCCACGGCCAATTCAACAGCCCCGAAGAAGACGAGGAAGATGACGGGTGCTGTTTGTACGCGATGAAGGTGGTGGACAAAGACGCAGTGGCACTGAAGAAGAAGTCGCAGAGAGCGGAAATGGAGAGAAAAATCCTGAAGATGCTGGACCACCCGTTCCTTCCTACGCTCTACGCGGAGTTCGAAGCCTCTCATTTCTCTTGCATCGTGATGGAGTTTTGCTCCGGTGGAGACCTTCACACGCTGCGCTTCAAGCATCCTCACAATCGTTTTCCTCTCTCCTCCGCCAGATTTTATGCCGCAGAGGTGCTGGTGGCGTTGGAATACCTACACATGCTGGGGATCATATACAGAGATTTGAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTTTGCTCGGATGCAATCCCAGCCGTGGAATGCTCAGATTCCTTGCACCATCCATCTCCAAATGCATTGCCTTATGCATACACTCCTCCCAATCACCATCCAACTCCCACTCGTTCGCATTCTTTTGCCAGTCCGTTCTCCTGCTTCTCGAACCGGGCTTTCCGGTCTCGTGACATCCGAACCGTGGAACCCAACCGGCTCTTCGTGGCCGAACCGGTTTCGGCCCGCTCCTGTTCCTTCGTCGGAACGCACGAGTACGTGTCGCCGGAGGTTGCCGCCGGGAGGTCGCACGGGAACGCCGTGGACTGGTGGTCCTTTGGAGTATTTATCTACGAGCTGATATACGGTCGCACGCCGTATGCGGGTCCATCGAAGGAGACTACGCTGCGGAACATCGTGAAAAAACCCCTCGCGTTCCCCACGGCCACGCCCGCGAGCGGTCTTGAAGGCCACGCGCGGGACTTGATATCCGGTTTGCTGAACAAAGACCCTGCGCGTCGGCTCGGGTCGAAGCGCGGTGCCGCTGACGTCAAGAAGCACCCGTTCTTCAAAGGTCTTAACTTGGCGCTGATTCGCATGCAGACGCCGCCCCAAGTGCCTGGCTCGAGAAGGACCAAAACGACGTCGCTGCACCCTGTGAAGGGTAACAGCAACAGCAACCACCATAAACTACATCAGACGGCGTCGTTTGATTTTTACTTTTAG 1875 0.544 MTVKTVEQQKASPSTLHHHTLISDCSVTCQSLNNAPNKSLPRHNPSSSAPQFVIILTNTNTPHVPKHPPRTCPAMLTHLLCTSSQHKYNATTFSCIASSLYFWPNPFFLSSPLIALKAYHPQLLLFFQFTVSISNLLSLSLSCSTTTMVECGGGERHSEASFETVNSSLLGSSMSSESICSTSFSRLSFDLLPPSPETLSLKPHRSSDFAYSAIRSATFRRKAALTFRDFHLLRRIGAGDIGTVYLCRLRHGQFNSPEEDEEDDGCCLYAMKVVDKDAVALKKKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHTLRFKHPHNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVECSDSLHHPSPNALPYAYTPPNHHPTPTRSHSFASPFSCFSNRAFRSRDIRTVEPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGRSHGNAVDWWSFGVFIYELIYGRTPYAGPSKETTLRNIVKKPLAFPTATPASGLEGHARDLISGLLNKDPARRLGSKRGAADVKKHPFFKGLNLALIRMQTPPQVPGSRRTKTTSLHPVKGNSNSNHHKLHQTASFDFYF 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01529 624 PANTHER FLIPPASE KINASE 1-RELATED 120 596 - -
Spst3g01529 624 SMART serkin_6 230 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01529 624 MobiDBLite consensus disorder prediction 588 612 - -
Spst3g01529 624 Gene3D Transferase(Phosphotransferase) domain 1 323 390 - -
Spst3g01529 624 FunFam protein kinase PINOID 2 228 322 - -
Spst3g01529 624 FunFam protein kinase PINOID 323 391 - -
Spst3g01529 624 MobiDBLite consensus disorder prediction 586 612 - -
Spst3g01529 624 SUPERFAMILY Protein kinase-like (PK-like) 212 598 IPR011009 -
Spst3g01529 624 Pfam Protein kinase domain 467 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01529 624 Pfam Protein kinase domain 230 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01529 624 FunFam serine/threonine-protein kinase D6PK-like 465 591 - -
Spst3g01529 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Spst3g01529 624 ProSiteProfiles Protein kinase domain profile. 230 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01529 624 Gene3D Transferase(Phosphotransferase) domain 1 466 591 - -
Spst3g01529 624 Gene3D Phosphorylase Kinase; domain 1 228 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01529 Spst-Chr3 18698651 18700707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01529 155 623 AGC Kinase Gene Family AT2G34650 63.368 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst3g01529 Pkinase 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01529 - - vun:114177159 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01529 3 18698651 18700707 Spst3g01529 3 18698651 18700707 ECH