Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01501 ATGTCCAAACCCTGGGGCAATATCGGAGCCTGGGCCGCCGATTCCGAGCGGGCCGAGGCCGAGGAGCGAGAGGCCCAGGCTGCGGCCGCTGCCGCCGAGACCCAAAACTTCCCCAGCCTCAAGGAGGCAGTGAACTCTAAGCCTAAGAAGAAGAAGGGAACCACCATCACGCTCTCTGAGTTCAACCGAGGCGGTTTTGCCTCTGGTGGGGAGCACCAGGGTCTGACGCGCGATGAGTTGATGGCGCTCCCTACCGGCCCCAAGGAACGTTCCCCCGAGGAAATGCAGTTCAATCGTCTCGGGGGAGGTTTCTCCTCATACGACCGTTCCGGCGGTCGCTCGCGCGACCGGGACGGCGGAAACAACGACGGCTCCTGGGGCGGAGGAGGGAGAAGATCGTACGGCGGATTCGACGAGGAACGCAGGGGTCCGAATCCTAGGGTTTCGGAACTCGATCAGCCTTCCAGGGCTGATGAGGTCGACAATTGGGCGTCCGTGAAGAAATCTGTGCCCGCGTTTGATTCTGGCCGGCAGAATCGCTACGGTGGCGGTGGTGGCGGCGGTTTTGGCGGCGGCGGTGGCGGTTTTGGTACCGGTGGTGGTGGTTTTGGTGGTGCGTCCAGGGCTGATGGTGTGGATAATTGGGCGGTTGGTAAGAAGCCTGTTCCGGTTAGATCTTCCAATTTTGGTTCTGGTTTTCGTGATTCCGGCGTGGAGCCTGATCGGTGGACAAGAGGTGGTCCACCGCGTGAGACGGAGCGGATGGAGCGTCCGAGACTGGTGTTGGATCCGCCGAGGGGTGATGGTTTGATGAATGAGGCTCCTGTGAAGGCTACAAACAAGGGTAATCCGTTCGGTGCGGCGAGGCCCAGGGAGGAGGTATTGGCTGAGAAGGGATTGGATTGGAAGAAGATGGATTCAGAGATTGAGGCGAAGAAGACGAGCCGGCCCACGAGCTCTCACTCTAGCAGGCCTTCCAGTGCTCAGTCCAATCGCTCTGAGGGTCCCGGGTTGCAGGGGGTGGATGTTGTGCAGAAATCGAGGCCCAAGATGAATCCATTTGGGGATGCCAAGCCTAGGGAGGTTCTGCTGGGTGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGAATTGGAGCATCGCGCTGTTGACAGATTGGTCTCTATGTTTTTGTTTGGTGCGTCTGGTGGCAACTCATATGGGTTGGATGCAAGTTGCCAGAGGTGCAATGTTAGGGTTCCACTGGTACTGGAGTCCCTTGAGGAGTTGATGTTGATGGTGAAAGGCATCAGTTGGCCTGAGACAATGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAAAAGGAACTTGGGAAGGAGTCTCCAATAAATTCAAACAAGGAATCTGTGGATGAGGCTGATGGAGACCAAACCAGTACACATGAAATACTACGACAGAAAGAAAAGGAGCTGGAACTTCTTGTCCGTGATTTGGATGACAAAGTACGATTTGGGCAGAAAGCCGTTGAAAGGCCGGGTTCTTCGGCAGGAAAGTCTTCTGGTTTGTCTGATAGGCCACCTTCTAGATCTGGCTCTTTTGAGGACTCCAGAAGTGTAGATTATACAGACAGACCTCGATCTCGTGGTACAGGAGATATGTGGGCACGTCCTAGTGATGACAGAAGACAGTTTCAAGGTAGCAGGGAAAGGGGGTGGTTTTCTGGCAGCAGAGATTTGAATAGGTCAAATTCAAGAGAGAGATGGTGA 1752 0.5451 MSKPWGNIGAWAADSERAEAEEREAQAAAAAAETQNFPSLKEAVNSKPKKKKGTTITLSEFNRGGFASGGEHQGLTRDELMALPTGPKERSPEEMQFNRLGGGFSSYDRSGGRSRDRDGGNNDGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSVPAFDSGRQNRYGGGGGGGFGGGGGGFGTGGGGFGGASRADGVDNWAVGKKPVPVRSSNFGSGFRDSGVEPDRWTRGGPPRETERMERPRLVLDPPRGDGLMNEAPVKATNKGNPFGAARPREEVLAEKGLDWKKMDSEIEAKKTSRPTSSHSSRPSSAQSNRSEGPGLQGVDVVQKSRPKMNPFGDAKPREVLLGERGMDWRKIDLELEHRAVDRLVSMFLFGASGGNSYGLDASCQRCNVRVPLVLESLEELMLMVKGISWPETMEEKLLKEEIDNLKKELGKESPINSNKESVDEADGDQTSTHEILRQKEKELELLVRDLDDKVRFGQKAVERPGSSAGKSSGLSDRPPSRSGSFEDSRSVDYTDRPRSRGTGDMWARPSDDRRQFQGSRERGWFSGSRDLNRSNSRERW 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01501 583 MobiDBLite consensus disorder prediction 500 583 - -
Spst3g01501 583 MobiDBLite consensus disorder prediction 318 336 - -
Spst3g01501 583 MobiDBLite consensus disorder prediction 511 530 - -
Spst3g01501 583 MobiDBLite consensus disorder prediction 309 358 - -
Spst3g01501 583 Pfam Plant specific eukaryotic initiation factor 4B 428 566 IPR010433 GO:0003743
Spst3g01501 583 Pfam Plant specific eukaryotic initiation factor 4B 1 385 IPR010433 GO:0003743
Spst3g01501 583 MobiDBLite consensus disorder prediction 134 163 - -
Spst3g01501 583 MobiDBLite consensus disorder prediction 531 562 - -
Spst3g01501 583 MobiDBLite consensus disorder prediction 452 480 - -
Spst3g01501 583 MobiDBLite consensus disorder prediction 238 263 - -
Spst3g01501 583 Coils Coil 476 496 - -
Spst3g01501 583 Coils Coil 13 35 - -
Spst3g01501 583 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 582 IPR010433 GO:0003743
Spst3g01501 583 MobiDBLite consensus disorder prediction 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01501 Spst-Chr3 18464054 18469993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01501 1 583 Eukaryotic Initiation Factors Gene Family AT3G26400 52.483 4.71e-145 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01501 - - gmx:100784238 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01501 3 18464054 18469993 Spst3g01501 3 18464054 18469993 ECH