Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01491 ATGCATGCTCTCTCCACCTTCTGTTCAAATCTCCATCTATCCAACAACAACATGTACATGCACATACTCCTCTCTTTTTCCCAACTCCTCTTCCTTCTCTTCCTCGCCCTTTATTTCGATGCCCTCATGGGAAAAACCAAAATTTCCAATCTCTTCGCTAATGACACCAACAATGACATGCTTCCATACTCCAACACCGTAAGACAAACTCTTGTGAACCGGCCAAGTTCCCTCAAAGATCGCTTTTCCTTTTCACTCTTTGAATTCTTGCGTCGCCTCATTCCTTCAAGAAAAGTTGATGGGGGCTCAAAAACCGAGGCAGAGGAGAAAGTCTACTCTTGGTTATACACCTTGGCTCTGTCTGACAAAAACATGGTCTTTGAGTACGTTAGGTCCACTGAAAGAGGCTTAAGTTTCACAGAAGCAGCGAGGAGACTGCGGGAAAATGGGCCAAATGTTCCACTTGAGTATTCCTTTCCAAGATGGTGGCATCTTCTATGGAACGCTCTTTTCCACCCTTTTAATATTATTCTGATTGTTTTGTCAGTAATGTCATTCATTGCCCGTGACAGTCCAAATGGATTTATCATGCTCGTGTTGGTTTTCATCAGTGTCACCCTCCGTTTCTATCAGGAATACAGCAGCTCGAAAGCAGCAATGAAGCTTTCAGAATTTGTAAAATGTCCAATAAAAGTTCAAAGATGCGCTGGTAGAGTTGTTCAGAAAGAACTTGTTGTTCAAGTTGATCATAGGGATGTAGTTCCAGGTGACATTGTGATTTTTGAACCTGGTGACCTCTTTCCTGGAGATATCAGATTACTATCTTCTAAACAACTTGTTGTGAGCCAGGCCTCTCTAACTGGGGAATCTTGGACAACCGATAAAACTGCTGATATCAGAGAAGACGACACTACTCCTTTATTGGATTTAAAAAACATCTGTTTTATGGGCACAAACGTGGTATCAGGTAATGGAACAGGCCTAGTGATTTCAACTGGATCCAATACTTACATGAGCACCATGTTTTCAAAAGTTGGGAAGAAGAAGCCACCAGATGAATTTGAAAAGGGTCTCAGATGGATATTTTACTTGCTTCTTTCTGTTATGCTTGTAGTTGTTACCATCATGTTTGTGGTAAATTACACTACATCTCTTGATTTGTCCCGAAGCCTTCTTTTTGCCATCTCTGTTGCCTGTGTCCTTAATCCTCAGATGCTTCCCCTAATCGTTAACACATGCCTTGCAAAAGGAGCACTTGCTATGGCTAAAGACAGGTGTATAGTAAAGAGTTTAACATCTATACGGGAGATGGGATCAATGGATATTCTCTGTATTGACAAGACAGGTACGCTTACAATGAATCATGCAATCATGGTTAATCATCTTGACTACAGGGGTTTACCCCAAGAAAAAGTTTTACGCTATGCCTTCCTCAACTCTTACTTTAAGACTGATCAGAAGTATCCTCTGGATGATGCTATTCTGGCATTTGTATATTCAAACGGATTCAGGTTTCAGCCATCTACGTGGAAGAAGATAGACGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATCTTAGAAACAGAAGACAGACACTCACAATTCTTTGGCAGGTTCATGGTAACAAAAGGAGCACTGTTAGAAGTATTGAAAGTTTGTTCATTTATTGAGAATTTCGATAAAGATGAAATTTCCCCCTTCACTTCAGATGATTATCAGCGTATTTTAAATCTCTCAGAAGATATTAGCAACGAGGGGTTAAGGATTATAGGGGTAGCTATAAGGAAGCTGGAAATGCCACAAACTTGTGAAACAAGTAACGGAAGCAAGAGAGAAGACGAGGATATTGAAAAAGACATGGTGTTCCTTGGCCTCATAACGTTTTTCGACCCACCTAAGGACACAGCAAAGCAAGCACTGTGGCGTTTGTCTGAGAAGGGAGTGAAAGCAAAGGTTTTAACTGGTGATTCCCTCTCCTTGACAACAAGGGTATGCAGGGAAGTTGGAATAAGCACCACTCATGTAATAACAGGTCCAGAGCTAGATCTACTTGACCAAGACTCTTTCCATGAGACAGTTAAAAGAGCAACAGTACTAGCACGTCTCACTCCAATCCAGAAACTCCATGTTGTGCAATCATTGCAAACAGTTGGAAACAGTGTTGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTGGCTTTAGATGCTGCCAACGTAAGCATTTCTGTGGACTCAGGAGTAGCCATTGCAAAAGACATGGCAGATATTATCCTACTTGAGAAGGACCTCAACGTGCTTCTTGCGGGAGTGGAGCATGGTAGACTCACATTTGGTAACACAATGAAGTATGTTAAGATGTCAGTGGTTGCCAACTTGGGAAGTGTCACTTCACTCCTGATAGCAACACTGCTATTCAAGTATGAGCCCTTAACTTCTAGACAGCTTCTTACTCAGAATTTCATCTACAGTGTGGGACAAATTGCCATTGCCTGGGACAAGATGGATGAAGAGTATGTTAAGACACCTCACAAGTCCTCAGAAAGAGGCTTGTTCATGTTCATATTGTGGAATGGATCAGTGTGCACTCTATGTGATGTGGCAACACTCATGCTTCTTTGGTTTTATTACAAGGCTTACACTGATGTGACCCAGAAGTTTTTTCATTCAGCGTGGTTCATTGAAGGTCTCCTCTTGCAGACCCTCATCATCCACTTGATCAGGACAGAGAGAATCCCTTTCATGCAGGAGGTTGCATCTTGGCCTGTGATTTTCTCCACCGTTGTGACTTCTGCAATTGGAATTGCACTTCCATTCACACCCATTGGGAAGATCATGGGATTCTCCCTTCTGCCTCTCTCATATTTCATACTTTTGCTGCTTCTTTTTCTTGGCTATTTTATAGTTGGCCAGGTGGTTAAGAGGCTTTACATATCGGTTTATAAGAGATGGCTTTGA 2967 0.4176 MHALSTFCSNLHLSNNNMYMHILLSFSQLLFLLFLALYFDALMGKTKISNLFANDTNNDMLPYSNTVRQTLVNRPSSLKDRFSFSLFEFLRRLIPSRKVDGGSKTEAEEKVYSWLYTLALSDKNMVFEYVRSTERGLSFTEAARRLRENGPNVPLEYSFPRWWHLLWNALFHPFNIILIVLSVMSFIARDSPNGFIMLVLVFISVTLRFYQEYSSSKAAMKLSEFVKCPIKVQRCAGRVVQKELVVQVDHRDVVPGDIVIFEPGDLFPGDIRLLSSKQLVVSQASLTGESWTTDKTADIREDDTTPLLDLKNICFMGTNVVSGNGTGLVISTGSNTYMSTMFSKVGKKKPPDEFEKGLRWIFYLLLSVMLVVVTIMFVVNYTTSLDLSRSLLFAISVACVLNPQMLPLIVNTCLAKGALAMAKDRCIVKSLTSIREMGSMDILCIDKTGTLTMNHAIMVNHLDYRGLPQEKVLRYAFLNSYFKTDQKYPLDDAILAFVYSNGFRFQPSTWKKIDEIPFDFIRRRVSVILETEDRHSQFFGRFMVTKGALLEVLKVCSFIENFDKDEISPFTSDDYQRILNLSEDISNEGLRIIGVAIRKLEMPQTCETSNGSKREDEDIEKDMVFLGLITFFDPPKDTAKQALWRLSEKGVKAKVLTGDSLSLTTRVCREVGISTTHVITGPELDLLDQDSFHETVKRATVLARLTPIQKLHVVQSLQTVGNSVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLLAGVEHGRLTFGNTMKYVKMSVVANLGSVTSLLIATLLFKYEPLTSRQLLTQNFIYSVGQIAIAWDKMDEEYVKTPHKSSERGLFMFILWNGSVCTLCDVATLMLLWFYYKAYTDVTQKFFHSAWFIEGLLLQTLIIHLIRTERIPFMQEVASWPVIFSTVVTSAIGIALPFTPIGKIMGFSLLPLSYFILLLLLFLGYFIVGQVVKRLYISVYKRWL 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01491 988 SUPERFAMILY Calcium ATPase, transmembrane domain M 132 985 IPR023298 -
Spst3g01491 988 SFLD C1.7: P-type atpase like 426 778 - -
Spst3g01491 988 SMART Cation_ATPase_N_a_2 117 190 IPR004014 -
Spst3g01491 988 ProSitePatterns E1-E2 ATPases phosphorylation site. 446 452 IPR018303 -
Spst3g01491 988 Gene3D - 193 940 - -
Spst3g01491 988 SUPERFAMILY Calcium ATPase, transduction domain A 238 343 IPR008250 -
Spst3g01491 988 Gene3D - 456 632 IPR023299 GO:0000166
Spst3g01491 988 SFLD p-type atpase 426 778 IPR044492 -
Spst3g01491 988 NCBIfam HAD-IC family P-type ATPase 197 487 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g01491 988 NCBIfam HAD-IC family P-type ATPase 695 807 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g01491 988 NCBIfam magnesium-translocating P-type ATPase 110 987 IPR006415 GO:0015444|GO:0015693|GO:0016020
Spst3g01491 988 Pfam haloacid dehalogenase-like hydrolase 440 742 - -
Spst3g01491 988 PANTHER CATION TRANSPORTING ATPASE 130 978 - -
Spst3g01491 988 Gene3D - 228 332 - -
Spst3g01491 988 SUPERFAMILY HAD-like 619 776 IPR036412 -
Spst3g01491 988 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 437 635 IPR023299 GO:0000166
Spst3g01491 988 PRINTS Magnesium-transporting ATPase signature 374 393 IPR006415 GO:0015444|GO:0015693|GO:0016020
Spst3g01491 988 PRINTS Magnesium-transporting ATPase signature 478 491 IPR006415 GO:0015444|GO:0015693|GO:0016020
Spst3g01491 988 PRINTS Magnesium-transporting ATPase signature 836 849 IPR006415 GO:0015444|GO:0015693|GO:0016020
Spst3g01491 988 PRINTS Magnesium-transporting ATPase signature 856 872 IPR006415 GO:0015444|GO:0015693|GO:0016020
Spst3g01491 988 PRINTS Magnesium-transporting ATPase signature 786 801 IPR006415 GO:0015444|GO:0015693|GO:0016020
Spst3g01491 988 PRINTS Magnesium-transporting ATPase signature 891 912 IPR006415 GO:0015444|GO:0015693|GO:0016020
Spst3g01491 988 PRINTS Magnesium-transporting ATPase signature 357 373 IPR006415 GO:0015444|GO:0015693|GO:0016020
Spst3g01491 988 PRINTS Magnesium-transporting ATPase signature 941 962 IPR006415 GO:0015444|GO:0015693|GO:0016020
Spst3g01491 988 Pfam Cation transporter/ATPase, N-terminus 126 185 IPR004014 -
Spst3g01491 988 Pfam E1-E2 ATPase 238 423 - -
Spst3g01491 988 Gene3D - 441 765 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01491 Spst-Chr3 18362736 18368587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01491 135 880 Primary Pumps ATPases(2) AT1G10130 26.824 7.25e-66 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01491 K01531 - pvu:PHAVU_002G260400g 1711.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01491 3 18362736 18368587 Spst3g01491 3 18362736 18368587 ECH