Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01469 ATGGCTGCACCAAGTTCAAGCTTTTTCTCTCGAGATTCCACACTATTCAGTGTGGGCGTGCCCCAAACTTTTAATCGCAAGGGATCAAGGTTGATTGTTAGAGCTGATGCAGATTATTATTCTGTCCTTGGGGTTTCAAAAAATGCTAGTAAATCTGAAATTAAGAGCGCAATATCAAAGCTCTTTGCTTTTGACATTTCAGCTTATAGGAAGCTTGCCCGGAATTATCATCCGGATGTCAACAAAGAACCTGGAGCTGAACAAAAGTTTAAGGAAATTAGCAATGCATATGAGGTGTTATCAGATGATGAGAAACGATCAATATATGACAGATTTGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGGATGGGGGATTTTAGTAATCCATTTGATCTGTTCGAATCACTGTTTGAGGGCATGAATCGCGGTTCAGGTTCCAGAGGTTCTTGGAATGGAGCAATTGACGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCGGTTTTTGGCATAGAAAAAGAGATAGAGATAAGTCGATTAGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGGACAACACCAACCAGATGTAGCACTTGTGGAGGTCAAGGTCGGGTTGTCTCTTCAACAAGAACTCCATTAGGTATCTTCCAGCAATCAATGACCTGTTCATCATGCAACGGGACTGGAGAAATTTCAACACCTTGCAATACATGTTCTGGGGATGGTCGGGTGAGGAAATCGAAGCGGATAAGTCTGAAGGTCCCAGCTGGTGTGGACTCTGGTAGTCGTCTAAGGGTCCGAAATGAGGGGAATGCTGGAAGGAGAGGTGGTTCCCCTGGGGACCTCTTTGTTGTCATCGAGGTTATCCCAGATCCTGTCCTTAAACGAGACGACACCAACATTTTATACACCTGCAAGGTTTCGTATATTGATGCAATCCTGGGGACTACAACAAAGGTTCCTACTGTGGACGGAATTGTGGATTTAAAAATTCCTGCTGGGACACAACCGAACACAACACTTGTTATGGCTAAGAAAGGTGTTCCCTTCCTCAATAAAAACAATATGAGAGGTGATCAGTTGGTTCGTGTGCAAGTTGAAATCCCAAAAAGACTCAGCAATGATGAGAGAAAGCTTATTGAGGAACTTGCAGATTTAAGCAAAGGCAAGACTACCACCGGTAGGAGATAG 1215 0.4362 MAAPSSSFFSRDSTLFSVGVPQTFNRKGSRLIVRADADYYSVLGVSKNASKSEIKSAISKLFAFDISAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRFGEAGLKGSGMGMGDFSNPFDLFESLFEGMNRGSGSRGSWNGAIDGEDEYYSLVLNFKEAVFGIEKEIEISRLESCGTCNGSGAKPGTTPTRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEISTPCNTCSGDGRVRKSKRISLKVPAGVDSGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTTKVPTVDGIVDLKIPAGTQPNTTLVMAKKGVPFLNKNNMRGDQLVRVQVEIPKRLSNDERKLIEELADLSKGKTTTGRR 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01469 404 Pfam DnaJ domain 67 110 IPR001623 -
Spst3g01469 404 Hamap Chaperone protein DnaJ [dnaJ]. 35 400 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Spst3g01469 404 FunFam Molecular chaperone DnaJ 179 255 - -
Spst3g01469 404 FunFam Chaperone protein dnaJ 1, mitochondrial 297 404 - -
Spst3g01469 404 FunFam Chaperone protein dnaJ A6 chloroplastic 35 149 - -
Spst3g01469 404 CDD DnaJ 38 102 IPR001623 -
Spst3g01469 404 Pfam DnaJ C terminal domain 162 377 IPR002939 -
Spst3g01469 404 SUPERFAMILY HSP40/DnaJ peptide-binding domain 155 309 IPR008971 GO:0006457|GO:0051082
Spst3g01469 404 CDD DnaJ_zf 187 250 IPR001305 GO:0031072|GO:0051082
Spst3g01469 404 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 174 254 IPR036410 -
Spst3g01469 404 NCBIfam molecular chaperone DnaJ 38 393 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Spst3g01469 404 Gene3D - 187 250 - -
Spst3g01469 404 Pfam DnaJ central domain 187 250 IPR001305 GO:0031072|GO:0051082
Spst3g01469 404 CDD DnaJ_C 158 380 - -
Spst3g01469 404 FunFam Putative Mitochondrial DnaJ chaperone 242 292 - -
Spst3g01469 404 SUPERFAMILY HSP40/DnaJ peptide-binding domain 302 388 IPR008971 GO:0006457|GO:0051082
Spst3g01469 404 ProSitePatterns Nt-dnaJ domain signature. 90 109 IPR018253 -
Spst3g01469 404 SMART dnaj_3 37 105 IPR001623 -
Spst3g01469 404 ProSiteProfiles dnaJ domain profile. 38 113 IPR001623 -
Spst3g01469 404 Gene3D - 297 403 - -
Spst3g01469 404 SUPERFAMILY Chaperone J-domain 35 144 IPR036869 -
Spst3g01469 404 Gene3D DnaJ domain 35 150 IPR036869 -
Spst3g01469 404 PRINTS DnaJ domain signature 85 105 IPR001623 -
Spst3g01469 404 PRINTS DnaJ domain signature 40 58 IPR001623 -
Spst3g01469 404 PRINTS DnaJ domain signature 69 84 IPR001623 -
Spst3g01469 404 PRINTS DnaJ domain signature 105 124 IPR001623 -
Spst3g01469 404 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 13 400 - -
Spst3g01469 404 Gene3D - 157 292 - -
Spst3g01469 404 ProSiteProfiles Zinc finger CR-type profile. 174 255 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01469 Spst-Chr3 18179411 18187683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01469 39 110 C2H2 Transcription Factor Family AT1G74250 39.744 3.98e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01469 K03686 - gmx:100792363 729.169