Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01455 ATGGCTGAGGTCAGACACTACGTTCTCCCCTCTCAATTGGATATTAAGCAAATTATTGTAGAAGCACAGCATCGATGGCTGCGTCCGGCTGAGATTTGTGCAATTCTCAGCAACTATACGAAGTTTCGAATTGCTCCAGAACCTGCTCATTTGCCACCAAGTGGTTCACTCTTCTTATTTGATCGGAAGGTGCTTAGATACTTCAGAAAGGATGGCCATAACTGGAGGAAGAAAAAAGATGGAAAAACAGTAAGAGAAGCACATGAGAGACTAAAGGCTGGAAGCGTGGATGTGTTGCACTGCTACTATGCTCATGGAGAAGAAGATGAGAATTTTCAAAGACGCACCTATTGGTTGCTTGAAGAGGAACTCTCTAACATTGTTCTCGTTCATTATCGACAAGTGAAGGGAACCAAGGCAAACTACACACGTGCTAAAGAAAATGAAGAATCTCTTCCTTATGCTCAACAAACTGACAAAATTATGCCCAAAACAGAGTTGGACACTTCCTTATCGTCTACTCTTCATCCACTTGGTTACCAGGTTCTTTCACGAACTATGGATACAAGCATGACCAGTGCTCAAGTATCAGAATATGAAGAAGCTGAATCTGATCAACCTACTAATTTGTATTCTCCTCGGCCACTCATAAATGACCGAGAGAAGTTACCTGCCATTGCTGAGGTGAATTATAGCTCATACACTCAAAATCAAAATATTATAGATATTCATAATGTTGGATTGACATATGAATCCCCAAAACCCCTGGGCTTTTCCTCATGGGAAGATATCTTAGAAAATAATGGTGGAAGTCAACACGTGCCTTTTCATTCTTTATTTCCTGAAACACAACCTGATAATATGGGAGTCAATAGAAATTTTTGTCAAGGAGATGACATAATGGTGCCACAATTGACCACCAACATTGCTAAGCTGCATGACAATGAAAGTCTCGTACAAGCTGAAGGAAGTTGGCAGGCTTATAGTGTTGATTCTTTACGCATGTCCAGTTGGCCTATAGATAGTGTCCATTCAAGCTCAACATGTGAGGTTAGTTGTAGGAGCTGTGAGCAGGAAGTTAATGAAGTTTATTTTCAGAAATCATTGGAACAGTGTCTTCTCCATCCACACAAACAAAACAAGGCTCTCATGCTAAACGATCATCAAGAGATACTGCTGAATACAAAAGAAAAGCTAAAATCAGATTTTGAGGCCAACAGAATCCTTGATGGAATAGAAGACACTCGTTTCACCTTTAAAAGGACCCTGTTAGATGGATCCCCAGCAGAAGAGGGTCTGAAAAAGCTTGACAGTTTCAATCAATGGATGAGTAAAGAGCTTGGAGATGTGGAAGAGTCAAATAAGCCATCCACTTCTGGTGCTTATTGGGATACAGTTGAAAGTGAAAGTGAGGTTGGCAGCGCAACCATTCCTTCCCAAGGGCACCTGGATACCTATGTATTGGATCCATCTGTTTCCAATGATCAGCTTTTTAGCATTATTGACTATTCCCCAAGCTGGGCATTTGAAGGGTCAGAAATTAAGGTTATCATTTCTGGACGATTCTTAAGATGTCAACAAGAAGCAGAACAATGTAAATGGTCATGCATGTTTGGCGAGGTAGAAGTGCCTGCAGTGATACTTGCAAAAGGTGTTCTTTGTTGTCATACTCCTCCACACAAGGCTGGGAGGGTACCTTTCTATGTAACTTGTTCCAATAGGTTAGCATGTAGTGAAGTGCGAGAATTTGATTTCCAAGTCAACTATACTAGAGAAGTCAAAACTGCAGGGGACGATAGAGCCAGCACTTTTGATACTTTCAGCAGACGATTTGGAGAATTGTTGTCACTGGGGTATGCCTTTCCTAAGAATTCAGGTTCAATCAGTGGAAATGAGAAATCTCAACTGAGAAGTAAAATCAGTTCTTTGCTAAGGGGGGAGGATGATGATTGGGACAAGCTACTGGAACTTACTCTAGAGAAAGATTTTTCTCCAGAAGATTTACAGGAGCAGCTGCTTCAAAATCTTCTGAAAGATAAGTTGCACGCATGGCTCCTTTGGAAAATTACAGACGATGGGAAAGGCCCCAATGTATTAGATGAGGGTGGCCAAGGTGTGCTTCATTTTGCTGCTGCTCTTGGCTATGATTGGGCCCTAGAACCCACAATAGTTGCTGGTGTAAATGTGAATTTTCGTGATGCAAATGGATGGACTGCTCTTCATTGGGCAGCATTTTGTGGCAGGGAGCGCACAGTTGCTTTCATCATCTCTCTTGGCGCAGCACCTGGATTACTGACTGATCCATGTCCAGAACATCCTTCTGGCAGAACACCAGCTGACCTAGCTTCTGCAAATGGACATAAAGGAATTGCAGGGTATCTTGCAGAATCTTCACTAAGTGCACACCTCACAACTCTTGATTTGAACAGGGATGTGGGAGATCATTCTGCAACAAAAGTAGTGAAAAGAATCCAAAACATTGCCGAAGTCAATGATCTTGATGGTCTATCATATGAACTGTCACTAAAAGATTCACTGGCTGCAGTGTGTAATGCCACCCAAGCAGCGGCTCGTATTCATCAAGTTTTCAGAATGCAATCATTCCAGAGAAAACAACTGAAGGAATATGGTGACAACAAATTTGGAATATCTGATGAACGTGCTCTTTCACTTGTAAAAATGAATGTGAAATCACACAAGTCTGGACCACGCGATGAGCCTGTCCATGCTGCTGCAATTCGTATCCAGAACAAATTTCGCGGTTGGAAGGGCAGAAAAGAATTTTTGATGATTCGACAACGTATAGTAAAAATTCAGGCTCACGTGAGAGGACACCAAGTTAGGAAAAACTGTGGGAAGATAATTTGGTCTGTTGGGATATTGGAGAAGGTCATTTTGCGTTGGCGTCGAAAAGGTAGTGGTTTACGAGGATTTAAATCAGAAGCCAATTCTGAGGTTAATATGATACAAGACGTATCTTCCGCTGAGGATGAGTATGATTTCTTGAAAGAGGGCAGGAAGCAAACAGAGCAAAGGTTGCAGAAAGCCCTAGCTAGGGTGAAGTCAATGGTTCAGTATCCAGAGGCAAGAGATCAATACCATAGGCTGTTGAATGTGGTAACTGAGATCCAAGAAAATCAGGTAAAGCATGATAGTGGTTGTAACAATTCAGAATAA 3177 0.4177 MAEVRHYVLPSQLDIKQIIVEAQHRWLRPAEICAILSNYTKFRIAPEPAHLPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEEDENFQRRTYWLLEEELSNIVLVHYRQVKGTKANYTRAKENEESLPYAQQTDKIMPKTELDTSLSSTLHPLGYQVLSRTMDTSMTSAQVSEYEEAESDQPTNLYSPRPLINDREKLPAIAEVNYSSYTQNQNIIDIHNVGLTYESPKPLGFSSWEDILENNGGSQHVPFHSLFPETQPDNMGVNRNFCQGDDIMVPQLTTNIAKLHDNESLVQAEGSWQAYSVDSLRMSSWPIDSVHSSSTCEVSCRSCEQEVNEVYFQKSLEQCLLHPHKQNKALMLNDHQEILLNTKEKLKSDFEANRILDGIEDTRFTFKRTLLDGSPAEEGLKKLDSFNQWMSKELGDVEESNKPSTSGAYWDTVESESEVGSATIPSQGHLDTYVLDPSVSNDQLFSIIDYSPSWAFEGSEIKVIISGRFLRCQQEAEQCKWSCMFGEVEVPAVILAKGVLCCHTPPHKAGRVPFYVTCSNRLACSEVREFDFQVNYTREVKTAGDDRASTFDTFSRRFGELLSLGYAFPKNSGSISGNEKSQLRSKISSLLRGEDDDWDKLLELTLEKDFSPEDLQEQLLQNLLKDKLHAWLLWKITDDGKGPNVLDEGGQGVLHFAAALGYDWALEPTIVAGVNVNFRDANGWTALHWAAFCGRERTVAFIISLGAAPGLLTDPCPEHPSGRTPADLASANGHKGIAGYLAESSLSAHLTTLDLNRDVGDHSATKVVKRIQNIAEVNDLDGLSYELSLKDSLAAVCNATQAAARIHQVFRMQSFQRKQLKEYGDNKFGISDERALSLVKMNVKSHKSGPRDEPVHAAAIRIQNKFRGWKGRKEFLMIRQRIVKIQAHVRGHQVRKNCGKIIWSVGILEKVILRWRRKGSGLRGFKSEANSEVNMIQDVSSAEDEYDFLKEGRKQTEQRLQKALARVKSMVQYPEARDQYHRLLNVVTEIQENQVKHDSGCNNSE 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01455 1058 Gene3D - 660 824 IPR036770 -
Spst3g01455 1058 SMART ANK_2a 735 764 IPR002110 GO:0005515
Spst3g01455 1058 SMART ANK_2a 774 803 IPR002110 GO:0005515
Spst3g01455 1058 FunFam Calmodulin-binding transcription activator 2 493 589 - -
Spst3g01455 1058 Pfam IPT/TIG domain 500 575 IPR002909 -
Spst3g01455 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 904 957 IPR027417 -
Spst3g01455 1058 Pfam IQ calmodulin-binding motif 909 928 IPR000048 GO:0005515
Spst3g01455 1058 Pfam IQ calmodulin-binding motif 933 950 IPR000048 GO:0005515
Spst3g01455 1058 SUPERFAMILY Ankyrin repeat 681 796 IPR036770 -
Spst3g01455 1058 FunFam Calmodulin-binding transcription activator 2 907 955 - -
Spst3g01455 1058 ProSiteProfiles IQ motif profile. 909 937 IPR000048 GO:0005515
Spst3g01455 1058 FunFam Calmodulin-binding transcription activator 2 664 811 - -
Spst3g01455 1058 Gene3D Immunoglobulins 492 589 IPR013783 -
Spst3g01455 1058 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Spst3g01455 1058 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Spst3g01455 1058 SMART iq_5 907 929 IPR000048 GO:0005515
Spst3g01455 1058 SMART iq_5 930 952 IPR000048 GO:0005515
Spst3g01455 1058 Pfam Ankyrin repeats (3 copies) 707 803 IPR002110 GO:0005515
Spst3g01455 1058 ProSiteProfiles IQ motif profile. 931 955 IPR000048 GO:0005515
Spst3g01455 1058 SUPERFAMILY E set domains 500 585 IPR014756 -
Spst3g01455 1058 Gene3D - 906 954 - -
Spst3g01455 1058 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 13 1046 - -
Spst3g01455 1058 ProSiteProfiles Ankyrin repeat profile. 735 767 IPR002110 GO:0005515
Spst3g01455 1058 SMART CG_1_2 18 136 IPR005559 GO:0003677
Spst3g01455 1058 Coils Coil 992 1019 - -
Spst3g01455 1058 ProSiteProfiles Ankyrin repeat region circular profile. 735 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01455 Spst-Chr3 18018975 18025840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01455 1 1057 CAMTA Transcription Factor Family AT5G64220 46.927 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Spst3g01455 CG-1 1.7e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01455 K21596 - gmx:100798875 1815.43