Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01434 ATGACGCAGCAGAATGTGATACCGTCCAAGACAAAATCCGGGATCAACAGGGACCTAACGGTTGCGCAGAAGCCACCGGCAGCGCCGGGAGGCTACATTCCCATTCCGAGGAGGAGGGTTTTGAAGAACCTTGAGATCAATGGAGGACAAAGAATCAATGCATGGGTGGATTCCATGAGAGCCTCTTCTCCCACCCACGCTAAATCAAACCCTTCTTTGGCTGAAGAACACAGCTCTTGGATTCTTCGCCACCCTTCTGCATTAGACATGTTTGAGCAGATTATGGATGCATCGAGGGGAAAGCAAATCGTCATGTTCCTGGACTACGATGGTACTTTGTCACCTATTGTTGATGATCCAGACCGTGCTTTCATGTCGGATTCGATGAGGAAAACGGTGAGGAAACTTGCAAGGTGTTTTCCCACTGCAATAGTTACCGGTAGATGCAGAGACAAGGTTTACAATTTTGTGCGCTTGGCTGAGCTATATTATGCGGGAAGCCATGGCATGGATATTCAAGGGCCAACAAGAGACTCCAAATACAGCAACAAAGAGAAGGGAGAGCCAGTTCTTTTTCAACCTGCCAGTGAATTTGTTCCCATGATAGATGAGGTGTACAATCGATTAGTTGAGAAAATGAAATCAATCCCTGGAGCTATTGTGGAGAACAACAAGTTCTGCGCCTCAGTTCATTTTCGCTGCGTTGAAGAAAAGAAATGGAGTGAACTGGCACAGGAAGTGAGATCAGTATTAAAAGAGTACCCGAAGCTTCGTCTTAACCAAGGAAGAAAGGTATTAGAGATTCGTCCATCCATTAAATGGGACAAAGGGAAGGCACTGGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTCTTTCCTGTTTACATTGGAGATGATAAAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGGATTCTTGTCTCGAAATTTCCAAAGGTCACTACTGCATCGTACTCTTTACAAGAACCAAGCGAGGCAAGTGATGGATTTCCTTCAACGTTTGGTGGAGTGGAAACAAGTTTCCCTTCGACTCCGAGCACGCTCCCGTGTGTAAATGAATAG 1113 0.4519 MTQQNVIPSKTKSGINRDLTVAQKPPAAPGGYIPIPRRRVLKNLEINGGQRINAWVDSMRASSPTHAKSNPSLAEEHSSWILRHPSALDMFEQIMDASRGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLARCFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIQGPTRDSKYSNKEKGEPVLFQPASEFVPMIDEVYNRLVEKMKSIPGAIVENNKFCASVHFRCVEEKKWSELAQEVRSVLKEYPKLRLNQGRKVLEIRPSIKWDKGKALEFLLESLGFANCNDVFPVYIGDDKTDEDAFKKLRDRGQGFGILVSKFPKVTTASYSLQEPSEASDGFPSTFGGVETSFPSTPSTLPCVNE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01434 370 CDD HAD_TPP 104 342 - -
Spst3g01434 370 FunFam Trehalose 6-phosphate phosphatase 103 190 - -
Spst3g01434 370 NCBIfam HAD-IIB family hydrolase 105 316 IPR006379 -
Spst3g01434 370 Gene3D - 185 271 - -
Spst3g01434 370 NCBIfam trehalose-phosphatase 101 342 IPR003337 GO:0003824|GO:0005992
Spst3g01434 370 FunFam Trehalose 6-phosphate phosphatase 195 271 - -
Spst3g01434 370 SUPERFAMILY HAD-like 104 342 IPR036412 -
Spst3g01434 370 Pfam Trehalose-phosphatase 106 341 IPR003337 GO:0003824|GO:0005992
Spst3g01434 370 Gene3D - 105 337 IPR023214 -
Spst3g01434 370 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 34 345 IPR044651 GO:0004805|GO:0005992
Spst3g01434 370 MobiDBLite consensus disorder prediction 1 18 - -
Spst3g01434 370 MobiDBLite consensus disorder prediction 1 30 - -
Spst3g01434 370 FunFam Trehalose 6-phosphate phosphatase 201 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01434 Spst-Chr3 17838933 17841289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01434 92 313 Trehalose Biosynthesis Gene Families AT1G70290 25.751 1.29e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01434 K01087 - gmx:100803119 617.846