Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01432 ATGGCAACCGCTATAGATATTTACACCAACATCGTACCGGATTTCCTCGATCCAGAGCTGATGAAAGCAGTTGAGTCTCTTATGAAAAGTGATTATTTCTCTGCCTCTTCCGAATCCGCTTCTCTCTCACGCCAATCACACCCTTCTTCCTCTTCCTCCTCCTTTTCTTCTTATTCTTATTATTCTCCCTTTACATATCCCTCCCCCAACCAAATCAAGCTCAACCAACTCACCCCAGACCAAATCCTCCAGATTCAGGCCCAAGTCGGCATTCAGCAGCACGTAGGCCTTTCGGGTCACCGTCAAAACCAAGCCCACCTGAGCCCAAAACGTCTCCCCATGAAGCACGGCGGCGCGGCTGCGAAAGCCGCGAAGCTGTACCGCGGGGTGAGGCAACGGCATTGGGGGAAGTGGGTCGCCGAGATCAGACTCCCGAAGAACCGCACGCGCCTCTGGCTGGGAACATTCGACACCGCAGAGGAAGCGGCGTTGGCGTACGACAAGGCAGCGTTTAAGCTCAGAGGCGAGTTCGCGCGCCTCAACTTCCCTCATCTGCGACACCAAGGAGCGTTCGTTTACGGCGACTTCGGAGATTACAAGCCGCTACCTTCTTCGGTGGACTCCAAGCTCCAAGCTATTTGCCAAAGCTTGGCCAAACAAGAAGAACAAAAAAAGTGTTGCTCGGTGGAAGACGTGAAACCCGTGATACATGCTGCTGCTGAGCTGGCACAGGTGGAGTCCGACGTGGCGCAATCCAACGTTTGTCCCGAGTTCGACAAGTTTAAGGTAGAAAAGGCGAACGAGAACGAGAACGAGAACGAGAACGACTACCCAACGTTGTCCTTGCCTGTGTCTGGGGAATCTTCTTCGCCTGAATCGGGTGTTACTTTCTTGGATTTCTCGGATTTGTCAGATTCTAACTATCAGTGGGATGAAATGGAGAGTTTCGGGTTGGAGAAGTACCCTTCGGTGGAGATTGATTGGGCGGCTATATGA 996 0.5241 MATAIDIYTNIVPDFLDPELMKAVESLMKSDYFSASSESASLSRQSHPSSSSSSFSSYSYYSPFTYPSPNQIKLNQLTPDQILQIQAQVGIQQHVGLSGHRQNQAHLSPKRLPMKHGGAAAKAAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAFKLRGEFARLNFPHLRHQGAFVYGDFGDYKPLPSSVDSKLQAICQSLAKQEEQKKCCSVEDVKPVIHAAAELAQVESDVAQSNVCPEFDKFKVEKANENENENENDYPTLSLPVSGESSSPESGVTFLDFSDLSDSNYQWDEMESFGLEKYPSVEIDWAAI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01432 331 MobiDBLite consensus disorder prediction 267 290 - -
Spst3g01432 331 MobiDBLite consensus disorder prediction 273 290 - -
Spst3g01432 331 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Spst3g01432 331 SUPERFAMILY DNA-binding domain 126 184 IPR016177 GO:0003677
Spst3g01432 331 Gene3D AP2/ERF domain 126 184 IPR036955 GO:0003700|GO:0006355
Spst3g01432 331 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 331 - -
Spst3g01432 331 SMART rav1_2 126 189 IPR001471 GO:0003700|GO:0006355
Spst3g01432 331 FunFam Ethylene-responsive transcription factor 2 125 184 - -
Spst3g01432 331 CDD AP2 127 185 IPR001471 GO:0003700|GO:0006355
Spst3g01432 331 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Spst3g01432 331 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Spst3g01432 331 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01432 Spst-Chr3 17808998 17809993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01432 4 331 AP2-EREBP Transcription Factor Family AT4G39780 45.897 4.23e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst3g01432 AP2 2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01432 K09286 - gmx:100797648 403.675