Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01422 ATGGCTTTGTCAGCCGTTGAAATCTCCAAGGAAGAAGAGAAGGTAACTTCAGAACATTATGAAAGGTCTCAGTGGGTGCTCAATGCTCCTGATCCCCCAACTACGTGGCACAAGCTCGGGGGTTCTGTGAGCAACACAATCTCAAAGTACCAAGAAATGTGCTTTGCTCTAAGAAGCCAACATGGACCTAAACTCTTACTTTCCTTCTTGAGGGGCATTTTTCCTATTCTTCAATGGGGTCCAAATTATTCACCAACCAAATTCAGAAACGACTTACTCGCTGGTCTAACCATCGCAAGTCTCTGCATTCCTCAGAGCATTGGGTATGCCACTTTAGCAAAGCTTGATCCTGAATATGGACTATATACTAGTGTGGTGCCACCTCTTATGTATGCTTTGATGGGAACCTCAAGAGAAATAGCAATTGGACCAGTGGCGGTGGTATCGCTTCTTTTGTCATCAATGATTGAGAAATTAATAGACCCTGCCATTGATCCAAACGGGTACAGAAAGCTTGTTTTCACTGCCACTTTCTTTGCTGGTATATTTAAAGCTGCTTTTGGACTATTGAGGTTGGGGTTCCTTGTGGATTTTGTGTCTCATGCTGCTATTGTTGGATTCATGGGGGGAGCAGCTACAATAATTGGTCTTCAACAACTGAAGGGACTATTTGGGATCAATCATTTTACCAACAAAACAGACATAATCTCTGTCATGAAATCGCTTTGGGAATCGATTCATCATCCTATTTCTGCTGACAAAAGTGGAGTTAACATTGTGAGACATATAAAAGGAGGATTGAATCCAAGCTCTATCAATCAGATAGAGTTGAACAACCCACACATTGGAGCACTGGCCAAAATTGGACTAGTCCTTGCGGCTGTTGCACTCACTGAATCAGTTGCTGTTGGACGATCTTTTGCATCCATGAAAGGATACCACCTTGATGGAAACAAGGAAATGGTATCATTAGGCTTCATGAACATTATAGGATGCATCTTTTCGTGCTATGTAGCAACTGGTTCTTTCTCTCGCACAGTGGTTAATTTCACTGCAGGTTGTGAAACATTAGCGTCAAACATTGTGATGGCCATTGTAGTGATCGTATCACTACAATGTTTGACGAAGCTTTTGTACTTTACACCAACTGCTATTCTGGCTTCAATAATCCTTTCAGCTCTGCCGGGACTCATAGACATTAACGAAGCTTACAAAATATGGAAAGTTGATAAGCTTGATTTTCTTGCTTGTGTTGGAGCCTTTTTCGGGGTGATCTTTTCGTCAGTGGAGCTTGGTCTGCTAGTGGCCGTGGCAATATCTTTCACAAAGATAATTTGGATCTCGATTGGAGCAGGCACAGAAACTCTGGGAAGACTTCCGGGCACAGATGTGTTCTGCGATGTACAGCAGTATCCTATGGCTGTTAAGACTCCTGGGGTTGCAATATTACGCGTCAAGTCTGCATTGCTTTGCTTTTCTAATGCCAATTCAGTCAGAGAGAGGATCCTGAAATGGATCACTCAGGAAGAAGCAAAGGGGAAAACAGAAGGCAACACCGGAAGCACAATTCAGCTAGTAATCCTTGATACCTCTAATTTGGTGAGCATTGACACATCAGGAATTGCTTCTCTAGAGGAACTGCATGAGAGTTTGGTCTCAAGTGGGAAGCAGCTAGCAATTGCCAATCCTAGGTGGCAAGTGATTTACAAGCTAAAGGGAACCAACTTTGTCACAAGAATTGGAGGAAGGGTCTTCTTGACTATTGGAGAAGCAATTGACTGCAATCTGGATTTCTAA 1797 0.4285 MALSAVEISKEEEKVTSEHYERSQWVLNAPDPPTTWHKLGGSVSNTISKYQEMCFALRSQHGPKLLLSFLRGIFPILQWGPNYSPTKFRNDLLAGLTIASLCIPQSIGYATLAKLDPEYGLYTSVVPPLMYALMGTSREIAIGPVAVVSLLLSSMIEKLIDPAIDPNGYRKLVFTATFFAGIFKAAFGLLRLGFLVDFVSHAAIVGFMGGAATIIGLQQLKGLFGINHFTNKTDIISVMKSLWESIHHPISADKSGVNIVRHIKGGLNPSSINQIELNNPHIGALAKIGLVLAAVALTESVAVGRSFASMKGYHLDGNKEMVSLGFMNIIGCIFSCYVATGSFSRTVVNFTAGCETLASNIVMAIVVIVSLQCLTKLLYFTPTAILASIILSALPGLIDINEAYKIWKVDKLDFLACVGAFFGVIFSSVELGLLVAVAISFTKIIWISIGAGTETLGRLPGTDVFCDVQQYPMAVKTPGVAILRVKSALLCFSNANSVRERILKWITQEEAKGKTEGNTGSTIQLVILDTSNLVSIDTSGIASLEELHESLVSSGKQLAIANPRWQVIYKLKGTNFVTRIGGRVFLTIGEAIDCNLDF 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01422 598 FunFam Sulfate transporter 31 451 597 - -
Spst3g01422 598 SUPERFAMILY SpoIIaa-like 475 593 IPR036513 -
Spst3g01422 598 CDD STAS_SulP_like_sulfate_transporter 471 586 - -
Spst3g01422 598 Pfam STAS domain 471 591 IPR002645 -
Spst3g01422 598 Pfam Sulfate permease family 252 418 IPR011547 GO:0016020
Spst3g01422 598 Pfam Sulfate permease family 88 248 IPR011547 GO:0016020
Spst3g01422 598 Gene3D STAS domain 452 595 IPR036513 -
Spst3g01422 598 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
Spst3g01422 598 PANTHER SULFATE TRANSPORTER 253 593 IPR001902 GO:0016020|GO:0055085
Spst3g01422 598 ProSiteProfiles STAS domain profile. 490 595 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01422 Spst-Chr3 17683641 17689984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01422 9 593 Inorganic Solute Cotransporters AT5G10180 60.315 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01422 K17469 - gmx:100775538 1009.21