Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01415 ATGGCACTCTCACTGTGTTCCGGTGTACGCGTTCCTTATTGTGCTCCTTCGTGTTTCTGGAAACCAAATGGTAAGAGTTGCAAAGCGCCTACTAAGGTGCCTTCTGCAGTTCACAGTGATAATAAGAATCCTTTGGTTGGAATGGGTATTGGGTTAGTAACAGCTTGGGTGATGGGTTTAACGGCGTTGGACGCGGACGCTACTAGAATCGAATACTACGCCACCGTTGGAGAGCCTTTGTGTGAGTACAAGTATGTGAAGTCTGGCCTCGGCTACTGTGATATTGTCGAGGGCTTCGGTGACGAAGCTCCAATCGGTGAGCTTATCAATGTTCACTATACTGCGAGATTCGCTGATGGGATAGTGTTTGATAGCAGCTACAAACGTGGTAGATCTCTCACCATGCGCATTGGTGTTGGCAAGGTAATCAAGGGACTGGATCAGGGAATTTCAGGGGGTGAAGGAGTACCTCCAATGCGGATAGGTGGGAAACGCAAACTGCAGATTCCTCCGTACTTAGCATATGGCCCTGAACCTGTGGGGTGCTTCTCAGGTGACTGCAACATACCCGCCAATGCCACTCTTCTGTATGATGTTAAATTTGTTGAGGTTTATTCGGGGAACAGATCAAAATGA 636 0.4811 MALSLCSGVRVPYCAPSCFWKPNGKSCKAPTKVPSAVHSDNKNPLVGMGIGLVTAWVMGLTALDADATRIEYYATVGEPLCEYKYVKSGLGYCDIVEGFGDEAPIGELINVHYTARFADGIVFDSSYKRGRSLTMRIGVGKVIKGLDQGISGGEGVPPMRIGGKRKLQIPPYLAYGPEPVGCFSGDCNIPANATLLYDVKFVEVYSGNRSK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01415 211 Gene3D - 79 203 IPR046357 GO:0003755
Spst3g01415 211 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 106 205 IPR001179 GO:0003755
Spst3g01415 211 FunFam Peptidylprolyl isomerase 78 204 - -
Spst3g01415 211 SUPERFAMILY FKBP-like 82 204 - -
Spst3g01415 211 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 25 209 IPR044183 GO:0009507
Spst3g01415 211 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 102 201 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01415 Spst-Chr3 17639270 17640629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01415 82 202 Calmodulin-binding Proteins AT3G25230 39.837 4.39e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01415 K01802 - gmx:100500547 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01415 3 17639270 17640629 Spst3g01415 3 17639270 17640629 ECH