Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01401 ATGGCTACCATGATTTGGATGGGAATTCTTTTAGTTTCACTTGCTTATCTGTGGCTGTGGAGAGGCAAGAACAAGGCAAAGAAATTACCACCTGGTCCCAAAGGGTTACCAATTTTGGGAAGTCTTCACAAGTTGGGAGCAAATCCTCATCGTGATTTGCATCAACTAGCCCAAAAATATGGACCTATCATGTATTTGCGCTTAGGTTTTGTGCCCGCCGTTGTTGTTTCTTCACCCCAAGCTGCTGAACTCTTCCTCAAAACCCATGACCTTGTCTTTGCTAGTAGACCACCTCATGAAGCTGCAAAGTACATCTCTTGGGAGCAGAGAAACTTAAGCTTTGCTGAATATGGTTCCTACTGGCGCAACGTTCGCAAGATGTGCACGCTGGAATTGCTTAGCCAAACAAAAATTAACTCCTTCAGAAGCATGAGGGAAGAGGAGGTTGACCTATTGGTCAAGCTCCTAAGAGAGGCAGCCAATGATGGAGATGCTGTTGATCTCAGTGCCAAAGTTTCAACACTCAGCGCAGACATGGCTTGTAGAATGGTTTTAGGGAAAAAGTACATGGACCGGGACTTGAATGAGAAAGGTTTCAAGGCTGTGATGCAAGAGGGAATGCACTTAGCAGCAACCCCTAACATAGGAGATTACATTCCTTACGTTGGTGCACTTGACCTTCAAGGCTTAACCAAGCGCATGAAAGTAGTTGCCAAAATCTTCGATGACTTCTTTGAGAAAATTATCGACGAGCACATGCAATCAGGGAAGGAAAGGAACAAGACCAAGGATTTTGTAGATGTCATGTTGGGCTTTGTCGGTACCGAAGAATCAGAATACCGCATTGAACGACCCCATATCAAAGCCATCTTGCTGGATATGTTGGCTGGGTCGATGGATACTTCTGCTACAGCAATTGAGTGGACACTCTCGGAGCTCCTGAAGAATCCAAGGGTGATGAAGAAACTCCAAATGGAATTGGAAACCGTGGTTGGTATGAAGAGGAAGGTGGAGGAATCAGACTTAGAGAAGTTGGAGTATTTGGACATGGTTATAAAGGAAAGCATGAGGCTTCATCCAGTAGCACCGTTGCTAATACCACACCAGTCCACAGAAGATTGCATGGTTGGAGATTTTTTCATACCTAAAAAGTCAAGGGTTATAGTGAATGCATGGGCAATTATGAGAGATCCAAGTGCATGGAGAGAGGCAGAGAAGTTCTGGCCAGAGAGATTTGAGGGAAGCAGCATAGATGTCAGAGGGCGTGAGTTCCAGCTGATACCATTTGGGTCTGGCAGAAGGGGATGTCCAGGAATACAATTGGGTCTGACTGTGGTTCGTCAAACTGTCGCACAACTTGTGCATTGTTTTGATTGGAAACTACCAAATGAGATGTTGCCAGCTGAGTTGGACATGGCAGATGAGTTCGGCCTCACAATGCCCAGAGCTACTCCTCTCCATGCCATTCCTACCTATCGCCTTCCAAATTAA 1491 0.4547 MATMIWMGILLVSLAYLWLWRGKNKAKKLPPGPKGLPILGSLHKLGANPHRDLHQLAQKYGPIMYLRLGFVPAVVVSSPQAAELFLKTHDLVFASRPPHEAAKYISWEQRNLSFAEYGSYWRNVRKMCTLELLSQTKINSFRSMREEEVDLLVKLLREAANDGDAVDLSAKVSTLSADMACRMVLGKKYMDRDLNEKGFKAVMQEGMHLAATPNIGDYIPYVGALDLQGLTKRMKVVAKIFDDFFEKIIDEHMQSGKERNKTKDFVDVMLGFVGTEESEYRIERPHIKAILLDMLAGSMDTSATAIEWTLSELLKNPRVMKKLQMELETVVGMKRKVEESDLEKLEYLDMVIKESMRLHPVAPLLIPHQSTEDCMVGDFFIPKKSRVIVNAWAIMRDPSAWREAEKFWPERFEGSSIDVRGREFQLIPFGSGRRGCPGIQLGLTVVRQTVAQLVHCFDWKLPNEMLPAELDMADEFGLTMPRATPLHAIPTYRLPN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01401 496 SUPERFAMILY Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 Gene3D Cytochrome P450 20 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PANTHER CYTOCHROME P450 93A3-LIKE 4 494 - -
Spst3g01401 496 FunFam Cytochrome P450 83B1 17 489 - -
Spst3g01401 496 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 Pfam Cytochrome P450 30 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01401 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Spst3g01401 496 CDD CYP71-like 59 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01401 Spst-Chr3 17508448 17510151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01401 1 496 Cytochrome P450 AT5G07990 40.588 1.00e-131 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01401 K20562 - gmx:100809526 862.833