Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01400 ATGATTTTGATAGCAATTATTTTAGTTTCTCTTGCTTTTCTGTGGCTATGCAGAACAAAGAAGAAGACAAATAATTTACCTCCTGGTCCCATGGGGTTGCCAATTTTGGGAAGCCTTAACAAGTTGGGAGCTTATCCTCATCGTGATCTGCACCAACTAGCTCTAAAATATGGACCTGTCATGTACTTGCGATTAGGTTTTGTGCCAACTATTGTTGTTTCTTCACCCAAAGCTGCTGAACTCTTCCTCAAGACTCATGACCTTGTCTTTGCTAGTAGACCACGTTTTCAAGCTGAAAAATACATATCTTGGGGGCAGAAGAACTTAGGCTTTGCTGAATATGGTTCTTATTGGCGCAACATGCGCAAGATGTGCACATTGGAATTGCTAAGTCAAACCAAAATTAATTCCTTCCAAAGCATGAGAGCAGAGGAGCTTGACCTGTTGATCAAGCTTCTAAGAGAGGCAGCCAATGATGGAGCTGTTGTTGATCTCAGTGCTAAGGTTTCAACACTTAGTGCAGACATGGCTTGTAGAATGATTTTAGGGAAGAAGTACATGGACCAGGACTTGGATGAGAAAGGGTTCAAGGCTGTGATGCAAGAGGCAATGCAGTTAGTAGCAACTCCTAACATAGGAGATTACATTCCTTACGTTGGTGCACTTGACCTTCAAGGGCTAACTAAGCGCTTGAAGTTAGTTTACAAAATCTTTGATGACTTCTTCGAGAAAATTATTAATGAGCACATGGAATCAAAGGGAGAAGACAGGACAAAGGATTTTGTGGATGTCATGCTGGGCTTTTATGGTACTGAAGATTCTGAATACCGCATTGAACGATCCAATATCAAAGCCATACTGATGGATATGTTGGCTGGGTCAATGGATACTTCTGCTACAGCAATAGAGTGGGCACTTTCAGAGCTGCTAAAGAATCGAAGGGTGATGAAGAAAGTCCAAATGGAGTTGGAAAGTGTAGTGGGTCTGAAAAGGAAGGTGGAAGAATCAGACTTGGAGAAGTTGGAGTATTTGGACATGGTTATAAAGGAAAGCATGAGGCTCCATCCAGTGGTACCGTTGCTAATACCACACCAGTCCACAGAAGATTGCATGGTTGGAGATATTTTCATACCTAAAAAGTCAAGGGTTATAGTGAATGCATGGGCAATTATGAGAGATCCAAGTGCATGGAGAGAGGAAGAGAAGTTCTGGCCAGAGAGATTTGAGGGAAGCAGCATAGATGTTAGAGGGCGTGAGTTCCAGCTGATACCATTTGGGTCTGGCAGAAGGGGATGTCCAGGAATACAATTGGGTCTGACTGTGGTTAGTCAAACTGTCGCACAACTTGTGCATTGTTTTGATTGGAAACTGCCCCATGACGTGTTGCCAGAAGACTTGGACATGACAGAGGAGTTTGGCCTCACAATGCCCAGGGCCAATCATTTACTTGCCATTCCTAGCTATCGGCTTTCCCAGGAGAGAGGGATTATCAGGGAAGAAAAAAATAAAGACCAGTGA 1518 0.4315 MILIAIILVSLAFLWLCRTKKKTNNLPPGPMGLPILGSLNKLGAYPHRDLHQLALKYGPVMYLRLGFVPTIVVSSPKAAELFLKTHDLVFASRPRFQAEKYISWGQKNLGFAEYGSYWRNMRKMCTLELLSQTKINSFQSMRAEELDLLIKLLREAANDGAVVDLSAKVSTLSADMACRMILGKKYMDQDLDEKGFKAVMQEAMQLVATPNIGDYIPYVGALDLQGLTKRLKLVYKIFDDFFEKIINEHMESKGEDRTKDFVDVMLGFYGTEDSEYRIERSNIKAILMDMLAGSMDTSATAIEWALSELLKNRRVMKKVQMELESVVGLKRKVEESDLEKLEYLDMVIKESMRLHPVVPLLIPHQSTEDCMVGDIFIPKKSRVIVNAWAIMRDPSAWREEEKFWPERFEGSSIDVRGREFQLIPFGSGRRGCPGIQLGLTVVSQTVAQLVHCFDWKLPHDVLPEDLDMTEEFGLTMPRANHLLAIPSYRLSQERGIIREEKNKDQ 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01400 505 Gene3D Cytochrome P450 16 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 CDD CYP71-like 56 482 - -
Spst3g01400 505 FunFam Cytochrome P450 83B1 14 485 - -
Spst3g01400 505 SUPERFAMILY Cytochrome P450 27 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 Pfam Cytochrome P450 27 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01400 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Spst3g01400 505 PANTHER CYTOCHROME P450 93A3-LIKE 3 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01400 Spst-Chr3 17504002 17505747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01400 1 487 Cytochrome P450 AT3G26300 39.511 4.05e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01400 K20562 - gmx:100809526 834.713