Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01384 ATGGAGACTCTCCATCGTCACAAAGCACTGAGTCATCGGAAAAAGCAACCTTCAGTGATGCCACTCATGGATTCACCACTGGTGCAACCTCTAAGAACAATAACAACGACAACAACATGCAAAAAGTGCAAGAAGGGGATTAATGGAAGCAAAACAGGGGTGGGTGGAAGGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGAAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATTTAAGGAACTACTACAAATGTTCAAGTGGAGGATGCATTGTGAAGAAAAGGGTGGAAAGGGACAGAGAGGACTCCAGCTATGTGATAACAACTTATGAAGGTGTGCACAATCATGAGAGCCCTTTTTCCACATACTACAGCCCCATCTCCTTCTTACATTCAGATGATTTTACATCCACCAAATGA 450 0.44 METLHRHKALSHRKKQPSVMPLMDSPLVQPLRTITTTTTCKKCKKGINGSKTGVGGRIAFRTKSELEIMDDGYKWRKYGKKSVKSSPNLRNYYKCSSGGCIVKKRVERDREDSSYVITTYEGVHNHESPFSTYYSPISFLHSDDFTSTK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01384 149 ProSiteProfiles WRKY domain profile. 64 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01384 149 FunFam WRKY transcription factor 57 55 129 - -
Spst3g01384 149 Pfam WRKY DNA -binding domain 70 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01384 149 SUPERFAMILY WRKY DNA-binding domain 61 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01384 149 Gene3D WRKY domain 53 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01384 149 MobiDBLite consensus disorder prediction 1 23 - -
Spst3g01384 149 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 132 IPR044810 GO:0003700
Spst3g01384 149 SMART WRKY_cls 69 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01384 Spst-Chr3 17242336 17243385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01384 55 144 WRKY Transcription Factor Family AT5G64810 65.556 1.17e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g01384 WRKY 4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01384 - - gmx:100500248 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01384 3 17242336 17243385 Spst3g01384 3 17242336 17243385 ECH