Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01364 ATGGGATGCGTTAACTCCAAATACACTCCTCCTCGTCGGAACGATGAGAGAAGGTTGAAACGAAACAATGAGGATGCACCCAAATCACTCGCCCGCCACCACAGCAAGGACTCTTCATCTAACAAGCACCAAGTGAGGTTGAAAGAAAAGGTAGAAAGAGTTGTGTCCAGTGAAAAAGAAAGAGATAATACTGATAGTGAGGTAAAGGGTGTTGCCAGAAACCATGACAAGAGTGATGAGGTTGGTGATAATGTTTCTGAGAGATCTCAGGAAAAGAAGAACATTACTGCACACACTGAGTTTGTGGAAGGTTGGCCAAAATGGCTTGTTGATAATATCCCACCAAACGTGTTGGATAGTTTGGCTCCCAAGAGTGCTGATTCCTATGAAAAACTTGGAAAGGTAGGGCATGGAACATATAGCAATGTGTACAAAGCCCGAGATAAAGAGAGTGGAAAGATTGTTGCTTTGAAGAAGGTAAGGTTTGACACATCAGATCCTGAAAGCATAAAGTTTATGGCAAGAGAGATAATGATTCTGCAGAAGCTGGATCATCCCAATGTCATCAAACTGGAAGGACTTGCAACATCAAGGATGCAGTATAGTCTTTATCTTGTTTTTGATTACATGCTCTCTGACCTTACAAGAATTATCTCTCGCCCTGGGCACAAACTCACTGAACCGCAGATCAAGTGTTATATGCAGCAACTGCTTCTGGGGCTCCAGCATTGTCATGAGAGGGGAGTTATGCATAGAGATATTAAACCTTCCAACTTGTTAGTAGACAAAAAAGGGGTGCTAAAAATTGCAGATTTTGGGCTGGCAAATTCTTTCGCTATAAAACCAGAAGGGCCATTCACAAATCGAGTGGTGACACTTTGGTATAGGGCTCCTGAACTTCTTTTAGGTTCAACAAATTATGGATGTGAAATTGATCTCTGGAGTGCAGGATGCTTGTTGGCTGAGATGTTCCTTGGAAGGCCACTTATGCCCGGGAGGACAGAGGTTGAGCAACTTCACATGATCTTCAAACTGTGTGGTTCACCTTCTGCGGAATATTGGATGAAAATGAAGCTAATAACAAGCTTCCTTCCACCACAACATTACAAACCTAATTATCACGAAAACTTCAAGGATTTTCCTTCCTCTGCATCTTCTCTCTTGACCACACTTCTTCATCTTCACTCTCAGGCACGTGGCACTGCCGCCACTGCTCTTCAAAGCCAATTTTTCAAGTCAAGTCCATTAGCATGCGACATTTCAGCGTTACCAGTAATATACAAAGACGAGGATGGTCGCTCACCAACAAAGAGACGCAAAAGGCGAAAGAGACTGAAAAATAAAGGGCATGTATTTCAAACAAGTACATGCAGTATGAACCAATCACTAAAGAACAATACTTCTGAACAGAGCAAGAGAGATTCAGAATCATCAAAAGAGAGAATTATGGAATCACTAAAAAGAATCATAGCAACGGGTGCTCTCTTTAACAACCAATGCTACGAGGATAATTTAGAATTGAAATTGGCCAAAGCTAAGAGTGTGGCAAGAGAGATGAAAGGTGAAGAAATTGGGAAAAGTGGAAGGGAGACTTGGTCACTTTTGATGAAGGAGAGTAGCACGAGCATGAACGGATCTATATCCCCACTTTTTCTCTCAAGTGTGAAAAAATCCCCTAAAACAGAGGGCCATCCGAATGCTCTTAAGAACATAAAAAACTATACCCTCTTACAAGCCTCAATAATTGATATTATCAATCGCAACCAAGGCAATGAAAGTGCTTCCTTGCGTAAGTCCTTTTCTGCGTTGGATTTTCGGCTTCATCCAGAGAAGCTATCAAGCCTCTACGGGCCTCTTCTGAAATCGCCCCACGAAACGTGA 1881 0.4221 MGCVNSKYTPPRRNDERRLKRNNEDAPKSLARHHSKDSSSNKHQVRLKEKVERVVSSEKERDNTDSEVKGVARNHDKSDEVGDNVSERSQEKKNITAHTEFVEGWPKWLVDNIPPNVLDSLAPKSADSYEKLGKVGHGTYSNVYKARDKESGKIVALKKVRFDTSDPESIKFMAREIMILQKLDHPNVIKLEGLATSRMQYSLYLVFDYMLSDLTRIISRPGHKLTEPQIKCYMQQLLLGLQHCHERGVMHRDIKPSNLLVDKKGVLKIADFGLANSFAIKPEGPFTNRVVTLWYRAPELLLGSTNYGCEIDLWSAGCLLAEMFLGRPLMPGRTEVEQLHMIFKLCGSPSAEYWMKMKLITSFLPPQHYKPNYHENFKDFPSSASSLLTTLLHLHSQARGTAATALQSQFFKSSPLACDISALPVIYKDEDGRSPTKRRKRRKRLKNKGHVFQTSTCSMNQSLKNNTSEQSKRDSESSKERIMESLKRIIATGALFNNQCYEDNLELKLAKAKSVAREMKGEEIGKSGRETWSLLMKESSTSMNGSISPLFLSSVKKSPKTEGHPNALKNIKNYTLLQASIIDIINRNQGNESASLRKSFSALDFRLHPEKLSSLYGPLLKSPHET 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01364 626 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Spst3g01364 626 MobiDBLite consensus disorder prediction 10 95 - -
Spst3g01364 626 Gene3D Transferase(Phosphotransferase) domain 1 212 452 - -
Spst3g01364 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Spst3g01364 626 Pfam Protein kinase domain 129 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01364 626 MobiDBLite consensus disorder prediction 430 480 - -
Spst3g01364 626 FunFam probable serine/threonine-protein kinase At1g54610 116 211 - -
Spst3g01364 626 Coils Coil 502 522 - -
Spst3g01364 626 ProSiteProfiles Protein kinase domain profile. 129 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01364 626 PANTHER CELL DIVISION PROTEIN KINASE 127 416 - -
Spst3g01364 626 SUPERFAMILY Protein kinase-like (PK-like) 125 416 IPR011009 -
Spst3g01364 626 Gene3D Phosphorylase Kinase; domain 1 118 211 - -
Spst3g01364 626 MobiDBLite consensus disorder prediction 450 468 - -
Spst3g01364 626 MobiDBLite consensus disorder prediction 1 95 - -
Spst3g01364 626 FunFam Putative serine/threonine-protein kinase 212 450 - -
Spst3g01364 626 SMART serkin_6 129 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01364 Spst-Chr3 17062936 17067624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01364 114 443 Core Cell Cycle Gene Families AT5G10270 44.828 4.95e-93 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Spst3g01364 Pkinase 1.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01364 K08819 - gmx:102667260 850.506