Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01350 ATGGATATTCACCACACACGTCCCCATAATAGAAAGACAAGAGCCAATGGCAGTGTGTCTGTCCTCACTACTTCGAGCAATATCTTCATTTCCCATAAAAGGTCAAAGATCATAGCCAAAAACACCATGAAAGGAAACAAGCATTATCTAGTTGTGATAATCATACAAGCCATCTACGCTGGCATGTTTCTGCTCTCAAAAGCAGCATTCGACCATGGCATGAACAATTTCATCTTTGTCTTCTATAGACAGACCGTAGCCACCGTATTCCTCACCCCTTTCGCTTTCTTCTTTGAATGGAAAACTGCACCCCCTTTGTCCTTTGTCACCTTCTGCAAGATCTTTTTCCTTTCTTTCCTGGGGATCACTGCTAGCTTGGACATATATGGTATTGCCCTTATTTACACTTCTGCTACTTTGGCTGCTGCTGTCACAAACTGCCTTCCAGTTATCACCTTCTTCTTAGCCCTCCTAGTCAGGGTAGAAGTTTTGAAAGTAAAGAGTGCCCCTGGTGTTGCAAAGTTGGTTGGAGTAGTGGCATGCTTAACTGGGGCAGCAATCCTTGCATTCTATAAAGGACCCCATTTGGAACTTTTAAGCCATTATCACCTTTTAGATTACCATAAAAGTCAACAACACCTGGGTCATGTTGCTTCTCGTTCATGGATCAAGGGTTGCTTCCTCATGCTCCTCGCCAACACCTTTTGGGGAATGTGGCTTGTGCTACAGACTTTTGTGATAAAAGACTACCCTTCAAAGCTGCTCCTCACAACTCTTCAGTGTTTCTTAAGCTCGATTCAGTCTTTGGGCATTGCCATGGCAGTAGAAAGAGACATTGAGCAATGGAAGTTGGGGTGGAATGTCAGACTCCTTGCTGTTGTCTATTGTGGAATTATGGTGACTGGTGTAACATATTACTTACAAACATGGGTTATAGAGAAGAAAGGACCAGTGTTTCTGGCCATGGCAACACCACTGGCTCTCATCATGACCATCTTCTCCTCCCCATTTATCTTGGGCGAGATAATAACTCTGGGAAGCCTTTTAGGTGGCATCGGTTTGGTTATTGGACTGTACTGTGTGCTGTGGGGAAAGAGCAGAGAACAAATTCCAAAAGCTTCCTTAGATTTGGAGGAGGCATTGGGTTAA 1149 0.4395 MDIHHTRPHNRKTRANGSVSVLTTSSNIFISHKRSKIIAKNTMKGNKHYLVVIIIQAIYAGMFLLSKAAFDHGMNNFIFVFYRQTVATVFLTPFAFFFEWKTAPPLSFVTFCKIFFLSFLGITASLDIYGIALIYTSATLAAAVTNCLPVITFFLALLVRVEVLKVKSAPGVAKLVGVVACLTGAAILAFYKGPHLELLSHYHLLDYHKSQQHLGHVASRSWIKGCFLMLLANTFWGMWLVLQTFVIKDYPSKLLLTTLQCFLSSIQSLGIAMAVERDIEQWKLGWNVRLLAVVYCGIMVTGVTYYLQTWVIEKKGPVFLAMATPLALIMTIFSSPFILGEIITLGSLLGGIGLVIGLYCVLWGKSREQIPKASLDLEEALG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01350 382 PANTHER WAT1-RELATED PROTEIN 49 369 IPR030184 GO:0016020|GO:0022857
Spst3g01350 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 82 192 - -
Spst3g01350 382 Pfam EamA-like transporter family 49 188 IPR000620 GO:0016020
Spst3g01350 382 Pfam EamA-like transporter family 224 362 IPR000620 GO:0016020
Spst3g01350 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 286 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01350 Spst-Chr3 16918592 16922417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01350 43 296 Nodulin-like Gene Family AT5G64700 62.403 3.39e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01350 - - gmx:100775854 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01350 3 16918592 16922417 Spst9g01740 9 19282617 19285918 PCT