Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01343 ATGAACTCTAGTGTCTTGGCCTGCAACTATGCCAGATCAGGATGCTCCGACCTTAATGCCAAGCTTTCTTCCGTGCCTTCGGTTGCATCTCCACCAGTGTCTGGTCTCAAGTTGCCTATCATCAAGGCTCAGCAAGCTAAAGTTGTTGAATCTAAATCAAACGAAGGAAGGAGAAATGCCCTTGTTTTCTTGACAGCTACCCTTTTCACTGCTGCAGCTGCTGCTTCCAACTCTCCTGCCAATGCTGGAATCATTGAAGAATACCTTGAAAAGAGCAAGGCCAACAAGGAACTGAATGACAAGAAAAGGTTAGCGACAACTGGGGCCAATTTTGCAAGAGCATACACTGTGGAATTTGGCACTTGCAAGTTCCCAGAAAACTTTACTGGTTGCCAAGATCTAGCTAAGCAAAAGAGGGAGAAACAGAGAAGAAGAAGAAGGAATGCACGTCTCCTTCGCTGGCGCCAAACGAAAACTAAAATGGAAAGGATGAATCCGCGTGATATCTCAACACGAAATATTGAACGTACAATAAAGCCGCACACGGATCGCTCCAAATCCAAAGGTCCAAAACGCAAACCTCCTTCCCTCCAAAATTTCAAACTCTGA 609 0.4532 MNSSVLACNYARSGCSDLNAKLSSVPSVASPPVSGLKLPIIKAQQAKVVESKSNEGRRNALVFLTATLFTAAAAASNSPANAGIIEEYLEKSKANKELNDKKRLATTGANFARAYTVEFGTCKFPENFTGCQDLAKQKREKQRRRRRNARLLRWRQTKTKMERMNPRDISTRNIERTIKPHTDRSKSKGPKRKPPSLQNFKL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01343 202 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 139 IPR008796 GO:0009522|GO:0015979
Spst3g01343 202 MobiDBLite consensus disorder prediction 162 184 - -
Spst3g01343 202 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 40 139 IPR008796 GO:0009522|GO:0015979
Spst3g01343 202 Gene3D - 83 145 IPR044907 -
Spst3g01343 202 MobiDBLite consensus disorder prediction 162 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01343 Spst-Chr3 16875663 16877491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01343 1 154 Calmodulin-binding Proteins AT5G64040 56.051 2.63e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01343 K02701 - csv:101204396 186.808