Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01338 ATGACGTTTCCTCATTTTGGCGTTTTCGTTTCAATTGTTCGTGCGAGAATGGAGTTCCTGGACGAGGACGCGAGGCCAAGGTTCGTGTTCCAGTCCGGTGCCGTTGCGAGCACCGAACCACCGGAGCCGAACCACAAACCTACCAAGCCGGTTCTCTTCGTCACCGTTTCTCTCTCTTCGCTCTTCCTCGCTCTCTCTCTCTTCTTCCTCGAATCCGAACCCTTCAAATCGCTCCTCTTCTGGCTCGCGCTCTCTCTCCTCCTCGGCCCCTTCGCTCCGCCCTCCATCACCGGCGGCGACGTCCGCGTCGGCCTCGGAGAGGTTGTCAACTTCCCTGATCCGGAGTCTGAAGCAGACGATGATATTAGGAAGCCTCCGCAGCGGAGATCCAGACAGCGGAGGCCCGAGGAAGACCCCGCCGTCGGTCCGGTGGTTTCCGTCTCCGCGGCGGAGAAGAGAGGAGGAGGTGGCGGAGTGGAGAAGGTTTCGACGGTGATGGAGGAGAAGGATTGGAGCGAGGAGGATGTGGAGGTGCTGAAGAAGCAGATGGTGAAGAATCCGGTGGGGAAGCCGGGGCGGTGGGAGGCGATATCGGCGGCGTTCGGCGGAAGGCACGGCGTAGAGAGTGTAATAATGAAGTCGAAGGAGTTGGGGGAAAAGAAAGTGGATGATTCGGAGTCTTATGCATTGTTCTTGAAGAACAGGAAGGCGTTGGATAAGAGGGTTGTGGAGGAGACTGGAGATGAGAATTCGGTGACGGTGGAGAAAGCTGTTGAGAATGGTTGGCGTTCTGGTGAGGATATCGCGTTGCTGAATGCATTGAAAGTGTTTCCTAAGGATGTTTCAATGAGGTGGGAGAAGGTTGCTGCAGCGGTTCCCGGGAGATCCAAAGCGGCTTGTATGAGAAGATTTGCGGAATTGAAGAAAGGGTTTCGGAGTGCAAAGGCTGCAACCGAGTGA 960 0.5615 MTFPHFGVFVSIVRARMEFLDEDARPRFVFQSGAVASTEPPEPNHKPTKPVLFVTVSLSSLFLALSLFFLESEPFKSLLFWLALSLLLGPFAPPSITGGDVRVGLGEVVNFPDPESEADDDIRKPPQRRSRQRRPEEDPAVGPVVSVSAAEKRGGGGGVEKVSTVMEEKDWSEEDVEVLKKQMVKNPVGKPGRWEAISAAFGGRHGVESVIMKSKELGEKKVDDSESYALFLKNRKALDKRVVEETGDENSVTVEKAVENGWRSGEDIALLNALKVFPKDVSMRWEKVAAAVPGRSKAACMRRFAELKKGFRSAKAATE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01338 319 FunFam Myb family transcription factor 256 316 - -
Spst3g01338 319 Gene3D - 255 319 - -
Spst3g01338 319 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 160 317 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Spst3g01338 319 SUPERFAMILY Homeodomain-like 259 308 IPR009057 -
Spst3g01338 319 ProSiteProfiles Myb-like domain profile. 254 308 IPR001005 -
Spst3g01338 319 MobiDBLite consensus disorder prediction 109 160 - -
Spst3g01338 319 CDD SANT 262 308 IPR001005 -
Spst3g01338 319 MobiDBLite consensus disorder prediction 116 138 - -
Spst3g01338 319 Gene3D - 164 223 - -
Spst3g01338 319 SMART sant 167 220 IPR001005 -
Spst3g01338 319 SMART sant 258 310 IPR001005 -
Spst3g01338 319 SUPERFAMILY Homeodomain-like 165 207 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01338 Spst-Chr3 16802827 16803786 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst3g01338 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01338 - - gsj:114413206 428.328