Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01337 ATGAGTTTGGCGGGGACAGAAAGTTCGGAGGAGGGTGCAGGGCATCTGGAGCCTCCTGATCCTGATATTCTTGAAATCGATCCAACATGCACCTATATCAAGTACAAAGAAGTGATCGGCAGAGGAGCCTTCAAAACTGTTTACAAGGCATTTGATGAAGTCAATGGGATTGAAGTTGCATGGAGTCAGGTTCAGATTGATGAGGTTTTACAGTCCCCCGGTGACTTAGATAGGCTATATTCAGAATTGCACCTCTTGAGATCACTGAATCACAGTAACATAGTAAGATTCTACAATTCCTGGATTGATGACAGGCGCAAGACCGTTAATATGATTACGGAGTTGTTTACCTCGGGTAGCCTCAAACAGTTTCGCAAAAAACACAAGAAGGTTGACTTGAAGGTCGTTAAAGGATGGGCAAGACAAATTTTAATGGGTCTAAAATATCTCCACGGTCACAACCCACCAGTTATTCATAGGGACCTGAAATGTGATAATATATTCATCAACGGTCACCAAGGAGAAGTTAAAATTGGAGATCTTGGGCTAGCAACTTTCTTGGATCGAAATAATGCCAAGAGTGTAATTGGAACCCCGGAGTTTATGGCACCCGAGCTGTATGATGAAAATTACAATGAATTAGCTGACATATATTCATTTGGTATGTGCATGCTTGAGTTAGTGACGTCTGAGTATCCTTATAGCGAATGCAGAAACTCAGCCCAGATATACAAGAAAGTTTCATCCGGTATAAAACCTGCTGCACTTTCTAAAGTGATAGATCCAGATATGAAAGCATTTATTGAGAAATGTCTAGTACCAGCGTCTCAAAGATTGTCAGCCAAGGAGCTTCTCATGGATCCGTTTCTTCAAACAAATGCTTCAACAAAGATGGGTCCTTTTCCATTGCCACATATTGTTCTTCCTAAATTGGGAGCCTCTGAAAGTCGTTGTATGGTGTCAGAAGGTCCTGCTACTGTACGTGATGGAGACATTTCTATGGATCTTGGTGACATCAATGAGCTTCCAGTGATTACTATATTTGATAAATCCACTGATGATGCCTCATGTTCTTCAAGTGTTGAGATAAGGAGGCAGAAGAGAGGTGATATTTTCTTTCTAAAAGGTGAAGAAAATGATAAGAACTCTGTGTCATTGGTTCTGCGGATAGCTGATCAAGGTGGACGAGCAAGAAATATCCATTTCATATTCTACCTTGACAGTGACACTGCTGTTTCAGTTTCAAGCGAAATGGTTGAGCAACTTGAACTTACTGATCAGAATGTTAAATTCATAGCTGAATTAATAGATTTGTTATTGACGAATTTGGTTGCTGACTGGAAACCCTGTGTAGCTATTGATCACTTGGTTACTCCTAGTAATAAACAAACTCATGTGAGCCAACAGGGAGCGTTGAAGTTGGCAAAATGCAAAGGAAGCTCAAAAGATTCGACTGAAGATTTAGGCCCCTCTACCTCATCTGCAACATTGGCTGCAAAAGAAAACCTGGATAATATGGATATCGATGGAGCTTTATCATACGATTGCACTTATCTTCAGAAAGCACCCAAATCAGATGATCCTTGCTCTGAGAAGTCGTATGCATCTGCAACAACTGAATTCAATGATAATAAGTTTTCTACGGTTTCATTCATGTCTGCTGCATCAGAATTTGATGGAGGAAGTCAATCCTCGTTTGCTTCTGAAATTGAGGGGTCACCTGATTCGAAGAGCAGGTTTTTAGACCTGGAAAACTTCTCTAATAGTCTCAACATTGTTTCTTCCTCGTTTGACCTTGAGACTGAATTGAAATTAGAGTTAGAAATGATTGAACAGAAGTATCAAGAAGCAATTAATGATTTATCCCAAAGAAGATACCAGGCTATCATGGAGATTAGAAGGAGAATGTCAGAAAAAATGGTATCATAG 1929 0.4007 MSLAGTESSEEGAGHLEPPDPDILEIDPTCTYIKYKEVIGRGAFKTVYKAFDEVNGIEVAWSQVQIDEVLQSPGDLDRLYSELHLLRSLNHSNIVRFYNSWIDDRRKTVNMITELFTSGSLKQFRKKHKKVDLKVVKGWARQILMGLKYLHGHNPPVIHRDLKCDNIFINGHQGEVKIGDLGLATFLDRNNAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPAALSKVIDPDMKAFIEKCLVPASQRLSAKELLMDPFLQTNASTKMGPFPLPHIVLPKLGASESRCMVSEGPATVRDGDISMDLGDINELPVITIFDKSTDDASCSSSVEIRRQKRGDIFFLKGEENDKNSVSLVLRIADQGGRARNIHFIFYLDSDTAVSVSSEMVEQLELTDQNVKFIAELIDLLLTNLVADWKPCVAIDHLVTPSNKQTHVSQQGALKLAKCKGSSKDSTEDLGPSTSSATLAAKENLDNMDIDGALSYDCTYLQKAPKSDDPCSEKSYASATTEFNDNKFSTVSFMSAASEFDGGSQSSFASEIEGSPDSKSRFLDLENFSNSLNIVSSSFDLETELKLELEMIEQKYQEAINDLSQRRYQAIMEIRRRMSEKMVS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01337 642 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01337 642 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01337 642 SUPERFAMILY Protein kinase-like (PK-like) 35 324 IPR011009 -
Spst3g01337 642 Coils Coil 600 620 - -
Spst3g01337 642 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Spst3g01337 642 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Spst3g01337 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Spst3g01337 642 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 20 635 - -
Spst3g01337 642 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Spst3g01337 642 Gene3D - 382 474 - -
Spst3g01337 642 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01337 642 MobiDBLite consensus disorder prediction 1 22 - -
Spst3g01337 642 CDD STKc_WNK 32 290 - -
Spst3g01337 642 Gene3D Transferase(Phosphotransferase) domain 1 116 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01337 Spst-Chr3 16799497 16802238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01337 133 464 MAP Kinase Kinase Kinase AT1G49160 66.867 1.47e-165 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst3g01337 Pkinase 8.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01337 K08867 - gmx:121175054 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01337 3 16799497 16802238 Spst3g01337 3 16799497 16802238 ECH
Spst3g01337 3 16799497 16802238 Spst9g01750 9 19355697 19358905 PCT