Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01323 ATGGATTATCTCTTCTTTCTCTTTCTCTCTCTCTCCCTCCTCCTAACCCTCTCCTCAGCCACGCACCAAAAAATCCCGCCACTCGCCACTTTCAAATCCGTCACGCCTGAGATCCAACAAGCCTGCGCAGCTACGCGCTTCCCGAAGATATGCGAAACCTCACTCTCTCAGGACCCCGAACTCCCACCCAACCCGACCTCTCTCCAGCTCATTCAGTCCGCCATCGCCATCTACTCCCAAAACCTCTCCACCGCGCAGTCCATGGTGAAGTCCCTCCTTGACGCCGCCGCCCACAGCCGCAATCTCACTATGGCAGTCTACACTTGCATCGAAGTGCTAGCCAACTCGGAGCGCCGCAGTTCCCTCGCCACGGACGCGCTTCCACGTGGCAAAATCAAAGACGCGCGCGCGTGGCTGGGCGCCGCGCTTGCTTACCAGTACGATTGCTGGAGTAGCCTCAAATATGCGAACGAGTCTGCGGCGGTCAGTAAAACGATGGCGTTCATCGACTCCCTCGAATCTCTCTCTACCAACGCCCTCAACATGGTCTTCTCCCTCGACGCCTACGGAAACGATACCGCTTCGTGGAAGCCTCCCACCACCGAGCGCGACGGCTTCTGGGGGACCCTCGGCTCCGCCGAATCCGGCCCCGTCGGAGGGGTTCCGTCCGATTTAAAGCCCGACGTTACGGTCTGCCAAGGGGGAGGTAACGGCTGTTATAAGACGATACAAGAGGCCGTTAACGCGTCACCAGATAACGGTGAGGGGACGAAGCGGTTTGTGATACTCATAAAAGAAGGAGTTTACAAGGAGACCGTTAGAGTTCCGTTAGCGAAGAGGAATGTGGTGTTCTTGGGTGACGGCGTTGGCAAGACGGTCATAACCGGCGATGCTAACGTGGGGCAACCTGCCATGACAACTTACAACTCTGCCACCGTCGCTGTTCTTGGAGATGGATTCATGGCAAAGGATCTGACGATTGAGAACACGGCTGGTCCAGACGCACACCAAGCAGTGGCATTCAGATCAGACAGTGATCTTTCTGTGATTGAGAACTGCGAATTCTTGGGCAACCAAGACACTCTCTATGCTCACTCCCTCCGCCAGTTCTACAAGTCATGCCGCATTGAGGGCAACGTGGACTTCATCTTCGGAAACGCTGCTTCAGTTTTCCAAGACTGCCTCATCCTGGTTCGTCCCAGGCAACTGAATCCAGAGAAGGGCGAGAACAATGCTATAACTGCACATGGCAGAACAGACCCTTCACAACCCACAGGCTTCGTTTTTCAGAACTGCGTGATTAATGGCACTGAGGATTACATGGCTTTGTATCACAGCAATCCTAAGGTGCACAAGAACTATTTGGGTAGACCTTGGAAGGAGTATTCTCGAACGGTTTTCATCAATTCAGAGTTGGAGGTCCTTTTGACGCCCCAGGGTTGGATGCCATGGAGTGGTGACGTAGGCCTGAAGACACTGTACTATGGGGAGTTTGGGAACCAGGGACCTGGTTCTGGTTTGTCCCAGAGGGTGCCCTGGAGTAGCAAGATCCCTGAAGAGCATGTCATATCTTATACAGTGCAGAATTTCATCCAAGGAAACGATTGGATTCCCTCTTCATCTTCTTAA 1629 0.5378 MDYLFFLFLSLSLLLTLSSATHQKIPPLATFKSVTPEIQQACAATRFPKICETSLSQDPELPPNPTSLQLIQSAIAIYSQNLSTAQSMVKSLLDAAAHSRNLTMAVYTCIEVLANSERRSSLATDALPRGKIKDARAWLGAALAYQYDCWSSLKYANESAAVSKTMAFIDSLESLSTNALNMVFSLDAYGNDTASWKPPTTERDGFWGTLGSAESGPVGGVPSDLKPDVTVCQGGGNGCYKTIQEAVNASPDNGEGTKRFVILIKEGVYKETVRVPLAKRNVVFLGDGVGKTVITGDANVGQPAMTTYNSATVAVLGDGFMAKDLTIENTAGPDAHQAVAFRSDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIEGNVDFIFGNAASVFQDCLILVRPRQLNPEKGENNAITAHGRTDPSQPTGFVFQNCVINGTEDYMALYHSNPKVHKNYLGRPWKEYSRTVFINSELEVLLTPQGWMPWSGDVGLKTLYYGEFGNQGPGSGLSQRVPWSSKIPEEHVISYTVQNFIQGNDWIPSSSS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01323 542 Pfam Plant invertase/pectin methylesterase inhibitor 38 182 IPR006501 GO:0004857
Spst3g01323 542 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 183 IPR035513 -
Spst3g01323 542 PANTHER PECTINESTERASE 16 538 - -
Spst3g01323 542 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 187 IPR035513 -
Spst3g01323 542 NCBIfam pectinesterase inhibitor domain 10 180 IPR006501 GO:0004857
Spst3g01323 542 SMART PMEI_2 33 182 IPR006501 GO:0004857
Spst3g01323 542 FunFam Pectinesterase 222 542 - -
Spst3g01323 542 FunFam Probable pectinesterase/pectinesterase inhibitor 51 36 185 - -
Spst3g01323 542 Gene3D - 222 542 IPR012334 -
Spst3g01323 542 CDD PMEI-like_3 41 183 - -
Spst3g01323 542 SUPERFAMILY Pectin lyase-like 226 539 IPR011050 -
Spst3g01323 542 Pfam Pectinesterase 228 534 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01323 Spst-Chr3 16680677 16682444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01323 27 541 Carbohydrate Esterase AT5G09760 61.538 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01323 - - gmx:100819675 873.233