Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01308 ATGAATCGGTGGTCCCGTCGGAAGCCTCGCCGGCGAGCATGGTGCTGCTCGTTCGCACTCCCTCCCTCCAGTCCTGAACTCACCTCAATCTCCAAAACGCCTCATAAAGCACAACCCTTTCCCAAGCGCAGCGTTTCGGTACCAAACTCCCCTCAGAGCGCCAAATCCGGGTTACCCATCGTGGGTCGGATCGACCCGCGCCGGATCTTGTCGCCGGGGAGAGTGTCTCCCATTGACTCCGATTCCGCCCCCGCCGCGTCGCAACTCCGATCCCACAGCTTTCGCGCTCCCTCTCCGCCCCCACCACCGGCGGCGGCGCTGGACGTGAAGCTGAAGCTGCGAGGGAAGAATGGGGGGAGCATGGTGATGGAGGTGGACTCGGAGGTTCTTGGAGCGAACTCGGAGGTGTTTGCGGGTTTAATAGCGGATTGCAAGAGAGGTGGGGGTGGAGCGACGATGGAGGTAGAGAACTTGGGTGTGTTCAGTGACACCATTGAGCTTATGTTTGAAGATGATGATTGCATCACCAAGAGGCTCATCAACTTTGGCGTTTTTCGCTCCATTGACATTTTAGCGGTTTCAGCAACAATTATGTTCACTAAGGGCGTTCGGTGTTGTTTAAAGTACCTTGAGGCGGTTCCTTGGACCGAGGAGGAAGAAGAGAAACTTCGGAGCCTTTTCGCAAGATTTGAGTTCGATGATGCAGCAAGAAGAGACATTCTGGGAAGACTGTACTTGCATGACTCAGTAGATTCCCGGCCAAAAGTGGCACAACAACTTGTTTGGTCTATCAGCACCTCTGAGGATGCAAATGCCAGAACCGAAATGAAGTCACTAGTCAAGGGTCTTCTTTGCAAAAGCTCTGTGTATGAGAAGAACCATCTTGACCTTAGCAAGGAAGATCTATATGCTGTTTGTGACTCGTGTTTGAGTTCACTTATCAGTCTCTTTGAAGAGGCATCAGATATCATGCCCCCTGAAAGGTTGATGACAAAAGACACGATCAAGCCTCTGATTGAGCGCATCTCAAGACAGGTTGATAACATCAACTGGTTGCTGGAAATTATGCTTGATGGGCAAGTGGCAGAGGACTTTGTGGATGTATGGGCACATCAGGAAAAGCTTCTTAAAATGCATGACATTGCATCCCCTATGATCAGATATGAACTCAGTAGAGTGTCAGCAATCCTATTTGTTGCTATGGGTACAAGAAAACTGCAATGCCCATTGGAAGCTAGATCAGGGCTTCTCCAAGCATGGTTTGGACCTATGCTGTTGGACTTTGGTTGGCTTCAAAGATGCAAAAAAGGGCTTGATATGAAGGCCTTGGAAGAGGCTATGGGGCAGACGCTCCTTACTTTACCTTTAAAGCAGCAGTATGTGCTGTTTATGGAATGGTTTCGGCATTTCTCAAGACATGGCACTGAGTGCCCAAATATGGGCAAGGCATTTCAAATTTGGTGGCGCAGATCTTTTTTAAGAGGCTCTGAAGCTGTTGAATCAAGATAA 1509 0.497 MNRWSRRKPRRRAWCCSFALPPSSPELTSISKTPHKAQPFPKRSVSVPNSPQSAKSGLPIVGRIDPRRILSPGRVSPIDSDSAPAASQLRSHSFRAPSPPPPPAAALDVKLKLRGKNGGSMVMEVDSEVLGANSEVFAGLIADCKRGGGGATMEVENLGVFSDTIELMFEDDDCITKRLINFGVFRSIDILAVSATIMFTKGVRCCLKYLEAVPWTEEEEEKLRSLFARFEFDDAARRDILGRLYLHDSVDSRPKVAQQLVWSISTSEDANARTEMKSLVKGLLCKSSVYEKNHLDLSKEDLYAVCDSCLSSLISLFEEASDIMPPERLMTKDTIKPLIERISRQVDNINWLLEIMLDGQVAEDFVDVWAHQEKLLKMHDIASPMIRYELSRVSAILFVAMGTRKLQCPLEARSGLLQAWFGPMLLDFGWLQRCKKGLDMKALEEAMGQTLLTLPLKQQYVLFMEWFRHFSRHGTECPNMGKAFQIWWRRSFLRGSEAVESR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01308 502 MobiDBLite consensus disorder prediction 20 103 - -
Spst3g01308 502 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 106 496 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01308 Spst-Chr3 16505774 16508007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01308 - - pvu:PHAVU_002G271800g 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01308 3 16505774 16508007 Spst3g01308 3 16505774 16508007 ECH
Spst3g01308 3 16505774 16508007 Spst9g01949 9 28687233 28689461 PCT