Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01304 ATGCCGGCGTGGTGGAGTAGAAAGTGGAGCAAGAGCAAGGAGGAGCACGAGGAGGCCGATGAGGAGGAGGAAGAGGAAGAGCCACGTGGCGTCTTTCAGTTGAGTTTCATGAAATCTCCGGTGGCCGTTCGGAGGGGTGACAAGAGTAAGTGTAAGAAGAACAAGAAGCAGCCCAAGAGCTTCGACGAGAAGATGAAAGGAGTTCCGTTGCCTCGTCCCACGCACAGTCACAGCGATCAAATTCAAACGTTTGGATCTCTCTCCGTGTCGGGTTCCAGCGTCAGCTCCTCCACCTCCTTCGACGATCACCCGATTTCGCCTCACTTTAATACCAACAGAGGACAAGATGAGGTGAGGTTCAATGTGACGTCAAAAAGTCCTGGTCCTGGGTCAAGAAGACCTACTAGTCCTACCTCACCGCTGCATCCAAGGTTACTTGCTTTGAGTCTTGACTCTCCTACGGGGAAGCAAGACGAGGCAAGGAGTGAGTGTCATCCGTTGCCTCTTCCACCTGGTTCTCCAACTAGTCCTTCTTCTGTGCTTTCCAATTCCATCACACGATCAAATGGATTGTTGGAAAACGCTACAAGCAGTGTGTCCAAATGGAGAAAAGGAAAGCTTCTAGGACGGGGAACATTTGGGCATGTGTATCTGGGATTCAATAGTGAAAATGGACAGATGTGTGCAATAAAAGAAGTCAAGGTTGTCTCTGATGATCAAACATCAAGAGAGTGCCTGAAACAACTTAACCAGGAGATAAATTTGCTAAAACAGCTTTCACATTCCAATATTGTTCAATACTATGGGAGTGAACTGGTGGAAGAATCTCTTTCCGTATATTTGGAATATGTCTCAGGTGGTTCTATCCATAAATTACTTCAGGAGTATGGTCCATTTAAGGAGCCCGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGACTTGCTTATCTGCATGCAAGAAATACAGTACACAGGGATATTAAAGGGGCAAACATACTAGTTGATCCTAATGGTGAAATCAAACTGGCCGACTTTGGAATGGCTAAACACATTAATTCTTCTGCCTCAATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTGATGAATACAAATGGCTATAGTCTTCCAGTTGATATATGGAGCTTGGGATGCACAATTATTGAAATGGCAACATCTAAACCTCCATGGAATCAGTATGAAGGGGTAGCTGCGATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCGGAGCATCTTTCCAATGATGCAAAGAATTTCATCAAACTATGCTTACAAAGAGACCCATTAGCTCGTCCAACAGCCCAAAAGTTACTAGACCACCCCTTCATTCAAGATCAATCAGCAACAAAAGCTACAAATGTCAGAATAACCAGAGATGCTTTCCCTTACATGTTTGATGGAAGCCGGACGCCGCCTGTGTTAGAGTCCCATTCCAACAGAACAAGTATAACATCGCTTGATGGAGATTATGCATCAAAGCCAGCTCTTGCAGCTCCACGTGCAATAAGAAGTCCAAGGGATAACTCAAGAATGATCACATCTCTACCAGTATCTCCCTGTTCAAGTCCATTGCGACGCTATGGGCCAACGGATCAGAGCTGTTTCTTTTCTCCTCCGCATCCAGCTTACACAATAATGGGACAAAATGGTTACACTTTGAATGACATATGCTCGTATCCCATGAGGTCAAATGCCACATTGACTCTTGATCCTTGGCATGATAGATCTCGATACAAAGCCAATACGCCACCTGGTGGATCTCCAAGAATGAGAATCATTTGA 1827 0.4483 MPAWWSRKWSKSKEEHEEADEEEEEEEPRGVFQLSFMKSPVAVRRGDKSKCKKNKKQPKSFDEKMKGVPLPRPTHSHSDQIQTFGSLSVSGSSVSSSTSFDDHPISPHFNTNRGQDEVRFNVTSKSPGPGSRRPTSPTSPLHPRLLALSLDSPTGKQDEARSECHPLPLPPGSPTSPSSVLSNSITRSNGLLENATSSVSKWRKGKLLGRGTFGHVYLGFNSENGQMCAIKEVKVVSDDQTSRECLKQLNQEINLLKQLSHSNIVQYYGSELVEESLSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTIIEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIKLCLQRDPLARPTAQKLLDHPFIQDQSATKATNVRITRDAFPYMFDGSRTPPVLESHSNRTSITSLDGDYASKPALAAPRAIRSPRDNSRMITSLPVSPCSSPLRRYGPTDQSCFFSPPHPAYTIMGQNGYTLNDICSYPMRSNATLTLDPWHDRSRYKANTPPGGSPRMRII 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01304 608 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 41 466 - -
Spst3g01304 608 MobiDBLite consensus disorder prediction 56 70 - -
Spst3g01304 608 ProSitePatterns Protein kinases ATP-binding region signature. 208 231 IPR017441 GO:0005524
Spst3g01304 608 SMART serkin_6 202 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01304 608 MobiDBLite consensus disorder prediction 1 184 - -
Spst3g01304 608 Pfam Protein kinase domain 203 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01304 608 SUPERFAMILY Protein kinase-like (PK-like) 200 525 IPR011009 -
Spst3g01304 608 Gene3D Transferase(Phosphotransferase) domain 1 198 478 - -
Spst3g01304 608 ProSiteProfiles Protein kinase domain profile. 202 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01304 608 MobiDBLite consensus disorder prediction 75 138 - -
Spst3g01304 608 FunFam Mitogen-activated protein kinase kinase kinase 200 482 - -
Spst3g01304 608 CDD STKc_MEKK1_plant 201 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01304 Spst-Chr3 16469388 16474829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01304 1 521 MAP Kinase Kinase Kinase AT1G53570 57.537 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst3g01304 Pkinase 8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01304 K04421 - gmx:100787064 952.584