Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01298 ATGGACGCAACAGCACTAACACGCATAGGTAGAAAAGCAGTGGCCATAGCAGTTGTAGGCATGTTCTTGCCTTTCGCATTTGGAGCTTTCTTTGCTATCTATTTGATCAGATTCGACGAATCAACCAAAAGCAGCGCTTACGTCCTATTCCTTGGTTCTGTTCTTTCTGTGGCTGCGTTTCCCGTTCTTGCCAGAATCCTTGCAGAGCTCAAATTCATCAACACTGAGTTAGGAAGGATTGCTCTTTCATCTGCACTCGTCAATGATCTGATTTCATGGATACTCTTGGCTCTGTCTATTAGTTTGGTGGAGAATAACAAGCCTTCTTTGTCACTCGTGTTGATTTTCTTGGCAGCTGTACTGTTTGTTGCTTTCAATATTTTTGTTGTGAGACCTGGGATCATGTGGATGATAAGGAGAACCCCCGAGGGTGAAGCATTCAGTGATCTCCATATGTGCATAATATTATCCGGTGTGATGCTCTCAGGTTTGATCACAGATGCTATTGGAACCCATTCAGTCTTTGGAGCCTTTGTGTTTGGTTTGACAATCCCAAATGGACCTCTAGGACTCTCTCTTGTGGAAAGGGTCGAGGACTTTATGACACTGCTTTTGCTCCCTCTATTTTTCGCCTCCAGTGGCCTAAAGACTGATCTTGGACTCCTCAAAGGGTTCTACACATGGGCAATGTTGATCATTCTTGTTATTTTGGCTTGCATTGGCAAAGTCATTGGAACTATGGCTGCTGCAATCTATTATCAAATGCCAGTTCGTGAAGCAGCAGTCCTTGGCTTGCTCATGAACACAAAAGGCGTTATTGAAGTTATTGTACTTAACATTGGCAAGGATCAAAAGGTTTTGACCGAAGAATCATTCGCAACCATGGTGATTATAACCGTACTAATGACCGCAGTAATTGTACCTGGGATGTCACTTATACACAAACCAACGAGGGCGGTGATACCTTACAAAAGAAGAACCATTCAGATGTCACACAGAGATTCAGAGTTCAGAGTCCTAGTGTGTATCCACGCCCCTCGAAATGTGCCAACAATGATTAACCTCCTTGACGCCTCTAATCCTACAAAGAATTCCCCAATATGCATTTACGCGCTCCATTTGACCGAACTCACTGGCCATCCATCTGGATTACTCGTTGTTCACAGTCATACGTCCAAGCAACCAGATACACCAGCCTTTTACAGGACTCAAACTCAATCTGAACACATTATCAACGCATTTAAGAATTATGAGCAAGTTGCTTCCCACGTCACAGTGCAGCCCTTGACAGCAATCTCCCCTTACTCCACCATGCATGAGGACGTATGCAACTTGGCTCAGGACAAGCGTGTGGCCTTCATAATCGTTCCTTTCCACAAACATCAAGCTATTGATGGTGAAATGGAGTCCACGAACATGTCATTTCGTACTGTGAACCTCAATGTTCTGAGCAAAGCACCGTGCTCAGTTGGGATTCTAGTGGATAGAGGCTTGCATGTGTCCCATCTGGCTCCAGATCAAAAGTCTCACTACGTGGCAGTGTTGTTCTTTGGAGGGCATGATGATAGAGAAGCCTTGAGTTATGGATGGAGGATGTCAGAACATCCATCGATAAACCTTACTGTGATGCGTTTTCTTCATGAGGAAGAAGTTATACATCAGCATAGTGACCACAATCCTGATGAACTAACCGTGAAAACGGATAAGGACACTCAGAAGCAACTTGATGAGAAGCTTTTACATTGGTTTAGGACAAGCCATGAGAATGAAGGTTCAGTTATTTATGTTGAGAAAATGGTGAACAATGGGGAGCAGACAGTGGCAGCAATAAGGTCAATGGATGATATTCATGACCTTTTCATAATTGGGAGAGGTCAAGGAATGAAGTCACCACTCACAGCAGGGCTCACTGATTGGAGTGAGTGTCCCGAGTTAGGGGCAATTGGGGACTTGTTAGCTTCATCAGATTTTGCAGCCACTGCTTCAGTGTTGGTAGTGCAACAATATGTTGGGGAGGAAATGGAAGAAGATGGACCGGGAACACCAGAAGGAGCAGACACCACCACCATGATGACAAACGAAGAATTTCTCAATCGAAATGGATCTCACCCAACACAGCAAAGGGACACAATAAGTTCAAATAGGAAAGTTTCTCAGTGA 2160 0.4421 MDATALTRIGRKAVAIAVVGMFLPFAFGAFFAIYLIRFDESTKSSAYVLFLGSVLSVAAFPVLARILAELKFINTELGRIALSSALVNDLISWILLALSISLVENNKPSLSLVLIFLAAVLFVAFNIFVVRPGIMWMIRRTPEGEAFSDLHMCIILSGVMLSGLITDAIGTHSVFGAFVFGLTIPNGPLGLSLVERVEDFMTLLLLPLFFASSGLKTDLGLLKGFYTWAMLIILVILACIGKVIGTMAAAIYYQMPVREAAVLGLLMNTKGVIEVIVLNIGKDQKVLTEESFATMVIITVLMTAVIVPGMSLIHKPTRAVIPYKRRTIQMSHRDSEFRVLVCIHAPRNVPTMINLLDASNPTKNSPICIYALHLTELTGHPSGLLVVHSHTSKQPDTPAFYRTQTQSEHIINAFKNYEQVASHVTVQPLTAISPYSTMHEDVCNLAQDKRVAFIIVPFHKHQAIDGEMESTNMSFRTVNLNVLSKAPCSVGILVDRGLHVSHLAPDQKSHYVAVLFFGGHDDREALSYGWRMSEHPSINLTVMRFLHEEEVIHQHSDHNPDELTVKTDKDTQKQLDEKLLHWFRTSHENEGSVIYVEKMVNNGEQTVAAIRSMDDIHDLFIIGRGQGMKSPLTAGLTDWSECPELGAIGDLLASSDFAATASVLVVQQYVGEEMEEDGPGTPEGADTTTMMTNEEFLNRNGSHPTQQRDTISSNRKVSQ 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01298 719 Gene3D - 364 635 - -
Spst3g01298 719 MobiDBLite consensus disorder prediction 672 719 - -
Spst3g01298 719 Pfam Sodium/hydrogen exchanger family 1 308 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst3g01298 719 MobiDBLite consensus disorder prediction 685 719 - -
Spst3g01298 719 Gene3D - 1 319 IPR038770 -
Spst3g01298 719 PANTHER CATION/H + ANTIPORTER 1 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01298 Spst-Chr3 16403881 16406407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01298 1 683 Antiporter Super Family AT2G13620 60.990 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01298 K26731 - gmx:100779048 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01298 3 16403881 16406407 Spst3g01298 3 16403881 16406407 ECH