Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01294 ATGCAAGGCTGTGAGGTTGAGGCCATTGGTGTCAACTACACCATCCACACACACAACTCGGAGCACCCTTTCAAAATCTTCAGCAAATCTGCACAACTTGACACTGAACAAGATGGTAAAGATCCAGAAGAGGAAGAAGAAGCTGAAAAAAGTTGCAGTGGAGCAAGGCATGTTTTGAAGAATGTGAGCTTCCAAGCCAAACCATGGGAGATCCTAGCAATTGTTGGGCCAAGTGGTGCTGGCAAATCTTCATTACTTGAGATTCTTGCTGGCAAACATAGCCCTCAAAGTGGTACTGTGTTGGTGAACCATAAGCCCGTGGACAAAGCTCAGTTCAGGAAGCTTTCAGGGTATGTGACACAAAAGGACACTTTGTTTCCTTTACTTACGGTTGAAGAAACCCTGATGTTTAGTGCAAAGCTGAGGCTGAAGCTTTCTCAGGAGGAACTTTGCTCCAGGGTCAAGTCATTGATTAAGGAGCTTGGACTTGACCACGTTGCTGGCATTAGAATTGGAGATGATAGGGCCCGAGGCATATCTGGTGGTGAGAGGCGCAGAGTTTCCATTGGTGTTGAAGTCATACATGATCCAAAAGTGCTGATTCTTGATGAACCAACTTCGGGGCTTGACAGTACTTCAGCTTTGCAAATAATTGACATGCTTAAGGTCATGGCTGACACAAGAGGGAGAACTATTATCCTTAGTATCCATCAACCCGGGTTCAGAATAGTGAAGCTGTTCAATTCATTGTTGTTGTTGGCTAATGGAAGTGTTTTGCACCATGGAACTGCTGAGTTGCTTGGAGTAAATCTAAGGCTGATTGGTTTGGAGCTTCCTCTTCATGTCAATGTAGTTGAATTTGCCATTGAGTCCATAGATACCATTCAACAACAACAGAAATGTGTGCCCGTTCAGGTAGAAACTCCAAGGCAATTGCATGGGACAATGCAACAGAAGAAAGTTGATGATGAAGCTGGTGAGGGTAGGAATGGAAAGTTTACTTTGCAACAACTGTTTCAACAATCCAAGGTAATTGATGAAGAAACCATCTATGCTGGAATGGATTTCACTTGTGATTTTGCTAATTCTAGATTGAGAGAAACAATGATTCTCACTCATAGGTTCTCCAAGAACATATTTCGTACAAAAGAGCTATTTGCTTGCAGGACAATTCAGATGCTGGTTTCTGGGTTGGTTGTGGGTTCCATCTTTTGTAACCTTAAGGATGATCTAGAGGGAGCTTATGAAAGGGTGGGTCTATTTGCTTTCATACTAACGTTTTTGTTGTCAAGCAGCATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTGATGAAGGAAACATCTTGTGGAAGCTACCGTGTGTCATCGTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTTCTCACCCTAGCCATTTTGTTCTCAATGCCCTTGTACTGGCTTGTTGGTCTCAACCGGAATTTCTTGGCCTTTTTGCACTTTTTGTTGCTGATATGGCTGATTCTTTACACGGCCAATTCAGTTGTGGTGTGCTTTAGTGCTCTGGTGCCTAATTTTATTGTTGGGAATTCAGTGATTGCTGGTGTTATAGGGTCATTCTTCTTGTTCAGTGGGTACTTCATATCAAAGCAAGAAATTCCAAACTACTGGATTTTCATGCATTATATATCTTTGTTTAAGTATCCCTTCGAAGGGTTCCTGATCAATGAGTTCTCAAACTCGGGGAAGTGCTTGGAGTACATGTTTGGGGCATGTATAAAGAGCGGAGAGGATGTGCTTGAAGAAGAAGGATACGGGGGAGAGAGTAATAGATGGAAGAATATTGGTGTCACTGTGTGCTTCATCTTGATTTACAGGTTCATCTCTTACGTTATTCTTAGATACAGATGTTCCCACAGGGGATTTGGTAAGGCTATCACCAACTAA 1941 0.425 MQGCEVEAIGVNYTIHTHNSEHPFKIFSKSAQLDTEQDGKDPEEEEEAEKSCSGARHVLKNVSFQAKPWEILAIVGPSGAGKSSLLEILAGKHSPQSGTVLVNHKPVDKAQFRKLSGYVTQKDTLFPLLTVEETLMFSAKLRLKLSQEELCSRVKSLIKELGLDHVAGIRIGDDRARGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGTAELLGVNLRLIGLELPLHVNVVEFAIESIDTIQQQQKCVPVQVETPRQLHGTMQQKKVDDEAGEGRNGKFTLQQLFQQSKVIDEETIYAGMDFTCDFANSRLRETMILTHRFSKNIFRTKELFACRTIQMLVSGLVVGSIFCNLKDDLEGAYERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLTLAILFSMPLYWLVGLNRNFLAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPNYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGACIKSGEDVLEEEGYGGESNRWKNIGVTVCFILIYRFISYVILRYRCSHRGFGKAITN 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01294 646 FunFam ABC transporter G family member 5 44 304 - -
Spst3g01294 646 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 626 - -
Spst3g01294 646 Pfam ABC-2 type transporter 368 576 IPR013525 GO:0016020|GO:0140359
Spst3g01294 646 Gene3D - 46 308 IPR027417 -
Spst3g01294 646 Pfam ABC transporter 59 207 IPR003439 GO:0005524
Spst3g01294 646 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524|GO:0016887
Spst3g01294 646 CDD ABCG_EPDR 50 262 - -
Spst3g01294 646 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 280 IPR003439 GO:0005524
Spst3g01294 646 SMART AAA_5 68 257 IPR003593 GO:0016887
Spst3g01294 646 MobiDBLite consensus disorder prediction 32 52 - -
Spst3g01294 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 265 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01294 Spst-Chr3 16357627 16359567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01294 58 314 Calmodulin-binding Proteins AT2G36910 25.651 8.47e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01294 K05681 - gmx:100789722 1180.24