Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01274 ATGAAAAGCCTCTGCCTTGGGCCGTTCCTTGCTGCCAGTGCCCCAGTTAGTTCAAGAGCCTTCGGAAGCCATTTAACCAGAAAGTGCTTTCATAAGCCAGTTCATTTCCACTCCCGTTCTGTTGTTTTCTCTTCAATCTCATGTTCTGCAACTCTATCAGTGTCGCCAGAAATAGAAGAGAAGCATATATTTGATGGAGAGAAGGCTAATTTGCTTGTCAGAGAGCTTAGAAAGAGCTTTGATTCAGGAAGGACAAAGAGCTATGATTGGAGGGTTTCCCAGTTGGAGGCCATAATTAAGATGTTAGAAGAGAGAGAGAAGGATATTATTGAAGCTCTATATAAAGACCTGGCCAAACCTCAATTTGAAGCATTTATATCTGAGGTTTCCCAGGCAAAATCCTCATGTAGTGAAGCACTCAAAGAACTGAAACACTGGATGAAGCCTGAGAAGGTGAGTACTTCAATCACGACATTTCCATCGTCAGCAGAGATTGTGCCAGAACCGCTGGGGGTTGTGTTGGTTATCTCAACATGGAACTTTCCTTTCTTGTTATCAATGGATCCAGTCATTGGAGCCATATCTGCGGGTAACACAGTGGTCCTAAAACCATCAGAAATTGCTCCAGCAACATCATCACTGCTTGCAACTTTGACCGAACAATACTTGGACAACTCTGCCATAAGAGTTGTTGAAGGGGCTGTCCCTGAAACAACTGCACTCCTGGAGCAGAAGTGGGATAAGATACTTTATACGGGTAGTGCTAGAGTTGGTCGGATTGTATTGGCTGCAGCTGCAAAGCATCTTACACCAGTGATTCTGGAACTTGGAGGAAAGTGTCCTGCCGTTGTTGAATCAGATGTCAACTTACAAGTTACTGCTAGGAGGATAATAGCTGGCAAATGGGCATGTAATAGCGGACAAGCATGCATTTCTATTGATTATATCATCACAAGAAAAGAGTTTGCTCCAAAGCTGATAAGTGCCTTAAAAGAAGAATTGGAACAATTTTTTGGGAAAGATCCGTTGGAATCAAAAGACATGTCACGGATTGTGTCTCTTAACCAGTTTGCACGGCTTGTGAAACTCTTGGATGAGGATAAGGTATCTGACAAAATCGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAGAATTTCACCAACTATCATATTGGATGTTCCTGAAGATGCTTTGGTAATGCAAGATGAGATATTTGGGCCAATATTGCCAATCATCACAGTAGACAACATAGAAGATTGTTACAGTATAATAAAATCAAGGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTACGTGGATAAGATATCTTCAGGAGGGATGCTCATCAATGACGCTGTCATTCATGTTGCAACAAATGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCATAGGAAGTCAGTTCTCTATAGAAGTTTTGATGCAGATTCATCCATAAGGTACCCCCCATATACACCTCAGAAGGGAAAATTATTGAAGGCCCTTATCAGTGGCAATATTGTTCAAACAATTCTTGCTCTTCTTGGATGGTCTTAA 1626 0.4164 MKSLCLGPFLAASAPVSSRAFGSHLTRKCFHKPVHFHSRSVVFSSISCSATLSVSPEIEEKHIFDGEKANLLVRELRKSFDSGRTKSYDWRVSQLEAIIKMLEEREKDIIEALYKDLAKPQFEAFISEVSQAKSSCSEALKELKHWMKPEKVSTSITTFPSSAEIVPEPLGVVLVISTWNFPFLLSMDPVIGAISAGNTVVLKPSEIAPATSSLLATLTEQYLDNSAIRVVEGAVPETTALLEQKWDKILYTGSARVGRIVLAAAAKHLTPVILELGGKCPAVVESDVNLQVTARRIIAGKWACNSGQACISIDYIITRKEFAPKLISALKEELEQFFGKDPLESKDMSRIVSLNQFARLVKLLDEDKVSDKIVLGGQRDEKKLRISPTIILDVPEDALVMQDEIFGPILPIITVDNIEDCYSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVIHVATNGLPFGGVEESGMGCYHGKFSFDSFSHRKSVLYRSFDADSSIRYPPYTPQKGKLLKALISGNIVQTILALLGWS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01274 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 478 IPR016163 GO:0016620
Spst3g01274 541 Pfam Aldehyde dehydrogenase family 66 498 IPR015590 GO:0016491
Spst3g01274 541 FunFam Aldehyde dehydrogenase 77 281 - -
Spst3g01274 541 PIRSF ALDH 51 537 IPR012394 GO:0006081
Spst3g01274 541 Coils Coil 92 112 - -
Spst3g01274 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 496 IPR016162 GO:0016491
Spst3g01274 541 PANTHER ALDEHYDE DEHYDROGENASE 68 533 IPR012394 GO:0006081
Spst3g01274 541 FunFam Aldehyde dehydrogenase 278 478 - -
Spst3g01274 541 SUPERFAMILY ALDH-like 71 514 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01274 Spst-Chr3 16195285 16199653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01274 12 541 Aldehyde Dehydrogenase Gene Family AT4G34240 63.346 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01274 K00128 - gmx:100800699 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01274 3 16195285 16199653 Spst3g01274 3 16195285 16199653 ECH