Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01272 ATGTCTGTGGTTCCTTGCAATTGCTACCACACCACTGAAAAGGGTAACTGTGGCGGTGAAATTGAAAGCTTTCACCAGTTTTTTGAGTGCTGGATTTCTGAGCAAAACCAACACCTGAAGGACCTTTTAGTTGCTGAATCAACTCAGCTAACAGGTGAAGAACTTCAGCCACTGATTGATGGGGTGGTTGAGCATTATGAATACTACTACAAGGCCAAGTCAAGTTGGGCAAAGCAAGATGTGTTGGCCATGTTGTCTCCAACATGGACGAGTTCCTTCGAAGAGGCTTTTCTTTGGATTGGTGGATGGCGACCAAGCATGGCCTTTCACTTGCTATATTCCAAGTCTGGTATGCAATTTGAGGCCAGGCTCAATGAATTGATCCAAGGTCTAAGAACATATGACTTGGGAGACCTATCAGCATCCCAACTAGCTCAGCTTGATGAGATGCAGAGGAGGACCATCTTAGAGGAGAGGGAGATCTCAGATTTGATGGCAAGGCACCAGGAGACATTGGCTGATGCCTCAATGGTGGAGTTGTCTCATGTGGTTTCTGAGATGATAAGATCCGATGAAAGAGACTTTAAGGAGAGTAAGGAAATAGAGGACAAGGTTGAATCAACCCTGGTGCCAAAAGAAGAGGGTTTGGAGGAGATCTTGCTGAAAGCTGATGAACTTAGGTTGGGAACACTGAAGGCTATTGTTAATGTTTTGGCTCCAAAGCAGGCCGTTCATTTCTTAATTGCTGCTGCAGAACTGCACCTGAGGCTACATGATTGGGGGAAGAAGATGGATGCTAGAAAGGGAAATCATGGTATTGGTGAGGGTAAAAATCATAATTCATCTATTTGA 852 0.4472 MSVVPCNCYHTTEKGNCGGEIESFHQFFECWISEQNQHLKDLLVAESTQLTGEELQPLIDGVVEHYEYYYKAKSSWAKQDVLAMLSPTWTSSFEEAFLWIGGWRPSMAFHLLYSKSGMQFEARLNELIQGLRTYDLGDLSASQLAQLDEMQRRTILEEREISDLMARHQETLADASMVELSHVVSEMIRSDERDFKESKEIEDKVESTLVPKEEGLEEILLKADELRLGTLKAIVNVLAPKQAVHFLIAAAELHLRLHDWGKKMDARKGNHGIGEGKNHNSSI 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01272 283 Pfam Seed dormancy control 38 114 IPR025422 GO:0006351|GO:0043565
Spst3g01272 283 ProSiteProfiles DOG1 domain profile. 21 267 IPR025422 GO:0006351|GO:0043565
Spst3g01272 283 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 22 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01272 Spst-Chr3 16174863 16175714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01272 31 266 bZIP Transcription Factor Family AT5G06950 26.446 4.86e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01272 - - gmx:100784399 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01272 3 16174863 16175714 Spst3g01272 3 16174863 16175714 ECH