Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01259 ATGAAGGTGAAGAAGGGTTGGCTGGCAGTTGAGGTAGAGGAAGAAGCAGAAGAGGGTTGTGGAGAAGGGTCTCAGAGATTCATGATTCCAATTTCGTATCTTTATCACCCACTCTTCAACAACCTTCTCGATAAGGCTTACGAGGTTTATGGGTACCACACAGAGGGTCCCCTCAAGCTCCCATGTTCAGTTGACGACTTTCTTCATCTCCGATGGAGAATCCACAAAGAATCCACCACCCACCATCGCCACAACCACAACCACAACCATCATCATCATCATCAACTTTCTCACTCCCATTTCCTCTCTTGTGATTACACTTTCATAATTGCTAAAGGGTGTGATGCGTGGAAAATGCAAGGTGGTTTTGAAGTTGTTGAAATGAGAAAGATGGATCTTTGGATTCCCCCGCGCGCTTGA 420 0.4595 MKVKKGWLAVEVEEEAEEGCGEGSQRFMIPISYLYHPLFNNLLDKAYEVYGYHTEGPLKLPCSVDDFLHLRWRIHKESTTHHRHNHNHNHHHHHQLSHSHFLSCDYTFIIAKGCDAWKMQGGFEVVEMRKMDLWIPPRA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01259 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 70 IPR003676 GO:0009733
Spst3g01259 139 Pfam Auxin responsive protein 3 73 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01259 Spst-Chr3 16067638 16073315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01259 3 105 Calmodulin-binding Proteins AT5G20810 33.010 8.51e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01259 K14488 - gmx:100797889 140.969