Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01256 ATGGAAAAGTCCTTCTGCTACGCCAATCATATCACTCTGCAACTTAAGTTTCTGATGGGAACTCCTCCGGTGAACTCGTTGCCAGTAGCATACCAAGCATGGACAAGCCTAGCAGTGCCGGATTGGCTCAACAAAGGAGACAACGCATGGCAAATGGTGTCCGCCACCTTGGTCGGGATTCAGAGCATGCCGGGCCTCGTCATTCTCTACGGAAGCATCGTCAAAAAGAAATGGGCCGTCAACTCCGCCTTCATGGCTCTCTACGCTTTCGCCGCCGTCGTCATCTGCTGGGTCACGTGGGCCTACAAGATGTCGTTCGGGGAGAAGCTGCTGCCGTTTTGGGGCAAGGCCGGGCCCGCCCTGGGCCAGAGGTTTCTGATAAAGCAGGCGGCGCTGCCCGCCACGCCGCACTATTACAGTAACGGTGATTTGGAGACTGCGGAGATTGAACCGTTTTACCCCATGGCTACTATGGTGTGGTTCCAGTGCGTGTTTGCGGCGATTGCGCTTGTGATCTTGGCTGGCTCGGTTCTGGCTCGGATGAACTTCAAGGCGTGGATGATGTTCGTCCCGCTCTGGCTCACTTTCTCTTACACCGTTGGCGCTTTTAGTTTGTGGGGTGGAGGCTTCTTGTTCCACTGGGGTGTCATGGACTACTCCGGTGGTTATGTCATTCATCTCTCTTCTGGAATTGCTGGCTTCACTGCTGCATACTGGGTGGGGCCAAGATCGAAGAAGGACAGAGAGAGATTCCCGCCAAACAATGTGTTACTAACGTTGGCAGGTGCGGGGCTGCTATGGCTGGGATGGGCGGGTTTCAACGGCGGAGATCCGTACGCGGCAAACACGGACTCATCGATGGCGGTGCTGAACACCAACATTTGCGCCGCCACCAGCCTCCTCGTATGGACGTGGTTGGACGTTATTTTCTTCAAAAAACCCTCAGTTATTGGAGCCGTTCAAGGCATGATCACTGGCCTTGTCTGCATCACTCCCGCAGCCGGTCTGGTTCAAGGATGGGCTGCCATAGTGATGGGAGTGCTTTCAGGGAGTGTGCCATGGTTCAGCATGATGGTGTTGGGAAAAAAGTGGAAAATATTTGAAATGGTTGATGACACCCTTGCTGTGTTCCACACTCATGCTGTGGCTGGCCTTCTTGGAGGAATACTCACTGGCCTATTCGCTGAGCCACGTCTAGGCGCACTCTTTCTTCCTGTCGCCAACTCCAGAGGAGGAATCTATGGAGGCCCTGGAGGAGTCCAGATTCTTAAGCAAATTGTCGGAGGTTTGTTCATCATTGGGTGGAACCTTGTGGCCACTTCAATCATTTGTGTGGTTATCAATTTCATAGTTCCACTCAGAATGACCGAGGAAGAGCTTCTCATAGGGGATGATGCAGTTCATGGGGAAGAGGCTTATGCACTGTGGGGTGATGGAGAGAAACTTAGCATCTACAAAGATGATACTACACACCATGGAATCGTGTCCAGTGGTGCCACTCAGGTCGTCTAA 1512 0.5298 MEKSFCYANHITLQLKFLMGTPPVNSLPVAYQAWTSLAVPDWLNKGDNAWQMVSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWVTWAYKMSFGEKLLPFWGKAGPALGQRFLIKQAALPATPHYYSNGDLETAEIEPFYPMATMVWFQCVFAAIALVILAGSVLARMNFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYAANTDSSMAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGVLSGSVPWFSMMVLGKKWKIFEMVDDTLAVFHTHAVAGLLGGILTGLFAEPRLGALFLPVANSRGGIYGGPGGVQILKQIVGGLFIIGWNLVATSIICVVINFIVPLRMTEEELLIGDDAVHGEEAYALWGDGEKLSIYKDDTTHHGIVSSGATQVV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01256 503 Pfam Ammonium Transporter Family 49 473 IPR024041 GO:0008519|GO:0016020|GO:0072488
Spst3g01256 503 FunFam Ammonium transporter 30 476 - -
Spst3g01256 503 PRINTS Rhesus blood group protein signature 257 275 IPR002229 GO:0005886
Spst3g01256 503 PRINTS Rhesus blood group protein signature 288 310 IPR002229 GO:0005886
Spst3g01256 503 PRINTS Rhesus blood group protein signature 343 361 IPR002229 GO:0005886
Spst3g01256 503 PRINTS Rhesus blood group protein signature 162 178 IPR002229 GO:0005886
Spst3g01256 503 SUPERFAMILY Ammonium transporter 42 455 - -
Spst3g01256 503 ProSitePatterns Ammonium transporters signature. 218 243 IPR018047 GO:0008519|GO:0016020|GO:0072488
Spst3g01256 503 PANTHER AMMONIUM TRANSPORTER MEP2 35 482 IPR001905 GO:0008519|GO:0016020|GO:0072488
Spst3g01256 503 Gene3D Ammonium transporter AmtB like domains 26 476 IPR029020 -
Spst3g01256 503 NCBIfam ammonium transporter 47 473 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01256 Spst-Chr3 16051435 16054936 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01256 155 492 Inorganic Solute Cotransporters AT2G38290 70.710 2.26e-165 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01256 K03320 - gmx:100785993 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01256 3 16051435 16054936 Spst3g01256 3 16051435 16054936 ECH