Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01234 ATGGCGGCGAAATCGAGTTCGAGTTCGACAAACGTGACCGTGAAGGCGGCGTGGGTTCTGCCGCACCGCACGAAGAACCTCCGGGAGGTGTACGAGGTGGGTAGGAAGCTGGGACAGGGGCAGTTCGGGACGACGTTCTTTTGCAGGCGCCGCGCCAGTGGGGGGAAGTTCGCGTGCAAGTCTATTCCGAAGCGGAAGCTTTTGTGCAAGGAGGACTACGAGGACGTGTGGCGGGAGATTCAGATAATGCACCACTTGTCGGAGCACCCTCACGTGGTTCGCATCGAGGGCGCCTACGAGGATTCCTCAGCCGTGCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTCGACCGGATAGTTCAGAAGGGCCACTACAGTGAGAGACAGGCGGCGAGATTGATAAAGACCATTGTTGAGGTTGTCGAGGCTTGTCACTCGCTTGGAGTCATGCATAGGGACCTTAAGCCTGAGAACTTTCTCTTTGACACTGTTGATGAGGATGCCAAGCTTAAAGCTACTGATTTCGGGTTGTCAGTTTTTTACAAGCCTGGTGGGTTGTGGTTTGAACTATGTGTGTGCTTGTTGCTACAATCTTTTGCTGAGGTTATGTGA 618 0.5485 MAAKSSSSSTNVTVKAAWVLPHRTKNLREVYEVGRKLGQGQFGTTFFCRRRASGGKFACKSIPKRKLLCKEDYEDVWREIQIMHHLSEHPHVVRIEGAYEDSSAVHLVMELCEGGELFDRIVQKGHYSERQAARLIKTIVEVVEACHSLGVMHRDLKPENFLFDTVDEDAKLKATDFGLSVFYKPGGLWFELCVCLLLQSFAEVM 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01234 205 ProSiteProfiles Protein kinase domain profile. 31 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01234 205 SUPERFAMILY Protein kinase-like (PK-like) 31 189 IPR011009 -
Spst3g01234 205 FunFam Calcium-dependent protein kinase 1 33 116 - -
Spst3g01234 205 Gene3D Phosphorylase Kinase; domain 1 33 116 - -
Spst3g01234 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Spst3g01234 205 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 185 - -
Spst3g01234 205 Gene3D Transferase(Phosphotransferase) domain 1 117 197 - -
Spst3g01234 205 SMART serkin_6 31 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01234 205 Pfam Protein kinase domain 31 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01234 205 FunFam CDPK-related kinase 3 23 190 - -
Spst3g01234 205 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01234 Spst-Chr3 15833232 15833849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01234 19 192 EF-hand Containing Proteins AT1G35670 73.563 1.64e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst3g01234 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01234 K13412 - gmx:100806678 348.591