Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01233 ATGGCAATCTTGGATGGGCTTACTCTAATGTGTGAGAGTGTGGATGGTTTCTCTCCGTTGTTTAGTGTTTTGGTTTCTAAATTTAGCAAGTGGGGTGGGGAGATTGTTGCTCTGATTGGTGGTGGATTGATGAATTCCTTATTCCAAGGTGAATCCTTTTGTGATGTTGTTGGGAGCCCATACTATGTTGCACCAGAGGTCTTGCGCAAGCTCTATGGGCCTGAATCAGATGTGTGGAGTGCAGGGGTTATTCTGTACATTTTATTAAGTGGGGTGCCACCATTTTGGGCTGAAACTGAACCAGGGATATTCAGACAGATTTTACTAGGAAAACTTGATTTTCAGTCTGAGCCTTGGCCTAGCATATCAGACAGTGCCAAGGATCTAATTCGGAAAATGCTTGATCAAAATCCAAAAACCAGGCTTACAGCACATGAAGTACTCCGCCATCCTTGGATTGTTGATGACGACATTGCACCAGATAAACCTCTAGATTCTGCAGTTTTATCACGCCTGAAACAATTCTCTGCAATGAATAAACTGAAAAAGATGGCATTGCGTGTTATTGCTGAGAGGCTATCTGAAGAAGAAATTGGTGGCCTGAAAGAGTTATTCAAGATGATTGACACTGACAACAGTGGAACCATAACGTTTGATGAGTTAAAAGATGGCTTGAAGCGAGTAGGATCTGATCTTATGGAGTCTGAAATCAAGGATCTCATGGATGCTGCAGATATTAATAAAAGTGGAACGATTGATTATGGTGAATTCATTGCCGCCACTGTTCATTTAAACAAGCTGGAGAGAGAGGAAAACCTGGTATCAGCCTTCTCATATTTTGACAAGGATGGCAGTGGTTACATAACCCTTGATGAGATACAACAAGCTTGTAAGGACTTTGGTTTAGATGATGTTCATATTGATGACATGATCAAGGAAATTGATCAAGATAATGATGGGCAAATAGATTATGGGGAATTTGCTGCCATGATGAGAAAGGGCAATGGAGGAATTGGAAGGCGAACTATGAGAAAAACAATAAATTTAAGAGATGCTTTTGGATTAGTAGACAATGGGTCAACTCAAGTTATTGAGGGCTACTTTAAGTAA 1110 0.4063 MAILDGLTLMCESVDGFSPLFSVLVSKFSKWGGEIVALIGGGLMNSLFQGESFCDVVGSPYYVAPEVLRKLYGPESDVWSAGVILYILLSGVPPFWAETEPGIFRQILLGKLDFQSEPWPSISDSAKDLIRKMLDQNPKTRLTAHEVLRHPWIVDDDIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSDLMESEIKDLMDAADINKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDVHIDDMIKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRKTINLRDAFGLVDNGSTQVIEGYFK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01233 369 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 327 - -
Spst3g01233 369 FunFam calcium-dependent protein kinase SK5 190 262 - -
Spst3g01233 369 ProSitePatterns EF-hand calcium-binding domain. 281 293 IPR018247 -
Spst3g01233 369 SMART serkin_6 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01233 369 ProSitePatterns EF-hand calcium-binding domain. 315 327 IPR018247 -
Spst3g01233 369 CDD EFh 201 260 IPR002048 GO:0005509
Spst3g01233 369 Pfam Protein kinase domain 42 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01233 369 SMART efh_1 236 264 IPR002048 GO:0005509
Spst3g01233 369 SMART efh_1 272 300 IPR002048 GO:0005509
Spst3g01233 369 SMART efh_1 200 228 IPR002048 GO:0005509
Spst3g01233 369 SMART efh_1 306 334 IPR002048 GO:0005509
Spst3g01233 369 SUPERFAMILY Protein kinase-like (PK-like) 42 176 IPR011009 -
Spst3g01233 369 ProSiteProfiles EF-hand calcium-binding domain profile. 196 231 IPR002048 GO:0005509
Spst3g01233 369 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01233 369 CDD EFh 273 332 IPR002048 GO:0005509
Spst3g01233 369 ProSiteProfiles EF-hand calcium-binding domain profile. 268 303 IPR002048 GO:0005509
Spst3g01233 369 ProSiteProfiles EF-hand calcium-binding domain profile. 232 267 IPR002048 GO:0005509
Spst3g01233 369 ProSiteProfiles EF-hand calcium-binding domain profile. 306 337 IPR002048 GO:0005509
Spst3g01233 369 Gene3D - 156 263 - -
Spst3g01233 369 FunFam Calcium-dependent protein kinase SK5 266 361 - -
Spst3g01233 369 Gene3D - 266 369 - -
Spst3g01233 369 Gene3D Transferase(Phosphotransferase) domain 1 26 155 - -
Spst3g01233 369 Pfam EF-hand domain pair 271 332 IPR002048 GO:0005509
Spst3g01233 369 Pfam EF-hand domain pair 201 261 IPR002048 GO:0005509
Spst3g01233 369 FunFam Calcium-dependent protein kinase SK5 63 158 - -
Spst3g01233 369 SUPERFAMILY EF-hand 192 333 IPR011992 -
Spst3g01233 369 ProSitePatterns EF-hand calcium-binding domain. 209 221 IPR018247 -
Spst3g01233 369 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01233 Spst-Chr3 15828831 15832845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01233 50 361 EF-hand Containing Proteins AT4G09570 77.778 2.43e-177 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst3g01233 Pkinase 3.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01233 K13412 - gmx:547825 628.632