Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01183 ATGGCAAAACAGCAAAACCAGGGCAAAGGCCAAGAGAAGGAATTGGAACTCGAAAGTGGCGTGTCTGAGGCTGAGATTGAGGCCCCATTGCCTCTCACTGTGACTTCTCGGGTTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAAGTTCACGCAATGGCTCCAATTAGTTCGTAAACGCACCGCAAATCATCGTTCTTCTGGCTTCCCTCGCCGCACTTCCATCACCATGTCGTCTAGTTCTTGCATTAGAGGACGGTTGGAGGATCCCAAACTGGAGCTGCACCCTGATCAGACAGAAATTAGCTTGTGGGAGAGGCTGGGAAAGGCTGCAATGTTGGACATTGAGTCGAGCTCTTTTTCATGGGACATGCTCTCTTCACTGCACCACACTGAACACAGCAGTAGCAATGAACAATCCGAGGATGAGATGAACAAAGCTCTCGAGGTAACTGTAAATTCTGGAGGAGTTGTCTTCTTTGCCTTTTTCAATTTACCTGGGAGTGCTAATACTTGTCCAAAAGAAGCAGCAGCAGTTATAAAGATATCACCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAGTTTCGAATGGCAACAAATAAAGGAAGCTGCAGAGAAAGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGTGAGGTGACATGTTTTGAACTTTTGGAAGCACTTGAGCTTAGCCGGTGCCTCTTTTTTATGAGTTATGTACACGGTTCACCCTTGCTTGAAAACTCTAGTGCATTTGAGTCAAAGGAATCCGCAGAAAGAACATCAGAAGCTCTTGGCAGGGTGCTAATGTTGGACCTTGTCATCAGAAATGAAGATAGGCTGCCTTGCCGTGAGCTTAGATGGCGTGGGAATCCAGCAAATTTGTTGTTGGCTGGAAAGATTTTCTGTGCAAATACAGATGTTCTGGAAGAGGCTTTTGATTCTGCAATTGACCGATATAGACCGAAGATGATAATGGCATTTCAGAAAGAAAGAAGGTCAACTTCAGTTGATTGCAGTCTCGATTCTCACAATCCTGGCTTGACATCACATTCCTCTGATCTTTCAGATATCGCAGAATCTCCAATATCTCCTGCCATGCACCTTACAAGTCAAACATCAGGAGAATTAATGTATCCGGACATCAACATAGTAGCCATTGATTCTGGTGTTCCTCGGCGACCCCCTGCTGGAAAACGTGCAAATGATCAGGTCAATTATCCTAAGTTGATTGAATTGCTAATCAACAGTTCCGAATTTGCCTCAAACCTGATATACGATGTAACTGGAGGGAAATTAGGATGTCCTCCATCAGAAGACATGGACAAAATTGATGTACATGGAAATGACGTAATGTCTGTAGTTCATGCATTCCGTGCTGGTTTCCGTGCTGCTCTCAGAGATCTGCAAGGATTTCACATATTCCTAGTCACACTTCACCAAAGACTTGATACTTTGTTACGATTATTTATGAACATTATAAGCAAAATATCTTTGGGAGAATTTGACAAAGAAGATGGTATGAATCCTGACTCACCTTCACTGACACCTGGCGGGCATTGTTACTCTCCATCAAGCAAGGAGAGGCTTAGTAATGATAACCATCACGATTATATTGATTCAGACTCACAGAGAACTGCTTCAAAGGCATCATTTTCAGGCAACAAAGATTGCAGTGACTCTACTCCTATGTCAAGAGAAACTTGGCATGGAAAGTTCTCTAAAGGAAATGGGGAATCATTTCGTAGTCTCCGTTTGACTAATAAGCTCCGTGACTTCCACAAATTTGCCAAGGTTGATGCTGAATCCAGTAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAGTGATGCCATCAAACTGTGCCAGGAGAACAATTTCAATCCAGGATTTTTCGAGGGTAGTGATAATAACTGTGTTGTTGATGCATATGAACTTAAGGTTAGACTTGAGCATATTCTCGAGAGAATTGCATTGATATCAGATGCTGCAAGTACTGAGAAACCTTCAGCAGTGACAAGCAATCTGTTCATTGGTGGAGCATTGGCGGCAAGATCTGTATACACACTGCAATACTTGGGAATTACAAATATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCCTGATCTATTTGAGTATAAGAATTTCTCTGTATGTGACAGTGATGATTACAACATCAGCAGCATATTTGAAGAAGCATGTGATTTTATAGATCATGTTGAACAAACAGGTCGAAGAGTTTTAGTTCACTGCTTTGAGGGGAAAAGCAGAAGTGTCACGATGTGGGTGACAGTTGCGACATGTTTTGAACTAATTTTTTCATTGTGCAGGAAGTATACTTTATTAGAAGCATGGCAAGCTCTGAAACGAGTTCACTGTCGAGCACAACCCAACGACGGTTTTGCAAAGATCTTGTTGGAATTGGATCAGAAACTATATGGAAAGGTTACGATGGAATGGCATCAGCGGAAACCAATGATGAAAGTCTGCCCCATATGTGGGAAGAATGCTGGACTAAGCAGCAGCTCACTCAAGCTCCATCTGCAGAAATCACATAGAAAGCTGTCCTCTGGTAGTGTAGATAGTGCCATGACCATGGAAATCCAGAAAGCATTGACAGCTTTGAATATTGGCCGTGGAGGGAGTGTCAGCCCCACACAAAGACAACAATCTCATCCAATAATAACAATAGAAACTGCAAACCCATAG 2808 0.4266 MAKQQNQGKGQEKELELESGVSEAEIEAPLPLTVTSRVLYMLGDITAGPAFKFTQWLQLVRKRTANHRSSGFPRRTSITMSSSSCIRGRLEDPKLELHPDQTEISLWERLGKAAMLDIESSSFSWDMLSSLHHTEHSSSNEQSEDEMNKALEVTVNSGGVVFFAFFNLPGSANTCPKEAAAVIKISPSRMATQSERLGYEFAKWLGVQTPQARVIHNTSFEWQQIKEAAEKAREAANSEGDEIGEVTCFELLEALELSRCLFFMSYVHGSPLLENSSAFESKESAERTSEALGRVLMLDLVIRNEDRLPCRELRWRGNPANLLLAGKIFCANTDVLEEAFDSAIDRYRPKMIMAFQKERRSTSVDCSLDSHNPGLTSHSSDLSDIAESPISPAMHLTSQTSGELMYPDINIVAIDSGVPRRPPAGKRANDQVNYPKLIELLINSSEFASNLIYDVTGGKLGCPPSEDMDKIDVHGNDVMSVVHAFRAGFRAALRDLQGFHIFLVTLHQRLDTLLRLFMNIISKISLGEFDKEDGMNPDSPSLTPGGHCYSPSSKERLSNDNHHDYIDSDSQRTASKASFSGNKDCSDSTPMSRETWHGKFSKGNGESFRSLRLTNKLRDFHKFAKVDAESSKELEQWNEMLKSDAIKLCQENNFNPGFFEGSDNNCVVDAYELKVRLEHILERIALISDAASTEKPSAVTSNLFIGGALAARSVYTLQYLGITNILCLCTNEIGQSETQYPDLFEYKNFSVCDSDDYNISSIFEEACDFIDHVEQTGRRVLVHCFEGKSRSVTMWVTVATCFELIFSLCRKYTLLEAWQALKRVHCRAQPNDGFAKILLELDQKLYGKVTMEWHQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALNIGRGGSVSPTQRQQSHPIITIETANP 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01183 935 Gene3D Protein tyrosine phosphatase superfamily 672 848 IPR029021 -
Spst3g01183 935 MobiDBLite consensus disorder prediction 532 600 - -
Spst3g01183 935 MobiDBLite consensus disorder prediction 556 570 - -
Spst3g01183 935 MobiDBLite consensus disorder prediction 1 20 - -
Spst3g01183 935 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 695 847 IPR029021 -
Spst3g01183 935 SMART dsp_5 695 844 IPR020422 GO:0006470|GO:0008138
Spst3g01183 935 Gene3D - 271 431 IPR036940 -
Spst3g01183 935 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 13 924 IPR035010 GO:0004721|GO:0009737|GO:0043622
Spst3g01183 935 MobiDBLite consensus disorder prediction 912 935 - -
Spst3g01183 935 ProSiteProfiles Dual specificity protein phosphatase domain profile. 695 847 IPR020422 GO:0006470|GO:0008138
Spst3g01183 935 Pfam Actin-fragmin kinase, catalytic 103 365 IPR015275 -
Spst3g01183 935 MobiDBLite consensus disorder prediction 571 595 - -
Spst3g01183 935 SUPERFAMILY Protein kinase-like (PK-like) 55 431 IPR011009 -
Spst3g01183 935 CDD DSP 696 840 - -
Spst3g01183 935 FunFam Dual specificity protein phosphatase PHS1 667 848 - -
Spst3g01183 935 Pfam Dual specificity phosphatase, catalytic domain 716 843 IPR000340 GO:0008138|GO:0016311
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01183 11 926 Protein tyrosine phosphatase (PTP) family AT5G23720 62.378 0.0 1091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01183 K14165 - gmx:100791993 1545.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01183 3 15319808 15326880 Spst3g01183 3 15319808 15326880 ECH