Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01182 ATGGCAATGACTGTGGTGTTGCTTAATCTGAGCTTTTCTTTGGAGATTTCCTGTCTCTCTTATCATGCAGATAGAATCGTTCGGCTTCCCGGGCAACCCAACATAGGCTTCCGACAGTTCTCAGGATATGTTATAGTGGATGACATCAAACACAAAGCTCTCTTCTACTATTTTGTTGAATCAGAAACTGATCCAGCTTCAAAGCCTCTTGTTCTCTGGCTTAACGGAGGACCTGGTTGTTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGGGAAGTTCTGATTAAAAATGAGTACAGTTGGAACAGAGAGACAAATATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTACTCCTACGAGACTGTGAATGATGACACAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCAATACAGGCACAGAGATTTGTTTCTAGCAGGTGAAAGCTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAAGAAACAAAAAGGAGAAGTTATTCAATCTGAAAGGCATAGCCTTAGGTAATCCAGTTCTAGAGTATGCCACTGACTTAAATTCAAGGGCCGAGTTCTTCTGGTCTCACGGATTGATATCAGATTCAACGTACAAATTGTTCACCACAGGTTGTAATTATTCCCGCTATGTCAGTGAATACTATAGAGACTCAATTTCTCCGCTTTGTTCAAAGGTTTTGAGGCAAGTAAGCAGAGAAACCAGTAAGTTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAGTCCAAATCTATTTGTCCTCAAGGCCAAAAAACAAATGAGAGCATAGATGTATGTGTAGATGACAAAGTTACTAATTACTTGAACCGAAAAGATGTACAAGAGGCCCTCCATGCAAAGCTTGTTGGAGTCCGAAAGTGGGATGTCTGCAGCAACATTTTGGACTACGATATGCTCAATCTGGAGGTACCTACACTCCCTATTGTTGGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGCACCTTGGTTCAAAAGCTGGCTAGACAACTAGGACTGAATACAACAGTCCCCTACAGAGTATGGTTTGAAGGCCAACAGGTTGGTGGATGGACTCAAGTTTATGGCAATATTCTCTCATTTGCTACTGTCAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCACTTGTTTTGTTCAAGTCATTCTTGAAAGACAGGCCTCTACCTGAAATTTTCTGA 1374 0.4229 MAMTVVLLNLSFSLEISCLSYHADRIVRLPGQPNIGFRQFSGYVIVDDIKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRETNMLYLETPVGVGFSYAKGGYSYETVNDDTTARDNLVFLQRWFNKFPQYRHRDLFLAGESYAGHYVPQLAKLMIERNKKEKLFNLKGIALGNPVLEYATDLNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVLRQVSRETSKFVDKYDVTLDVCISSVLSQSKSICPQGQKTNESIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNILDYDMLNLEVPTLPIVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLKDRPLPEIF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01182 457 ProSitePatterns Serine carboxypeptidases, histidine active site. 420 437 IPR033124 GO:0004185
Spst3g01182 457 Gene3D - 305 341 - -
Spst3g01182 457 Pfam Serine carboxypeptidase 33 449 IPR001563 GO:0004185|GO:0006508
Spst3g01182 457 SUPERFAMILY alpha/beta-Hydrolases 27 454 IPR029058 -
Spst3g01182 457 ProSitePatterns Serine carboxypeptidases, serine active site. 167 174 IPR018202 GO:0004185
Spst3g01182 457 Gene3D - 351 449 - -
Spst3g01182 457 FunFam Carboxypeptidase 19 454 - -
Spst3g01182 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 104 116 IPR001563 GO:0004185|GO:0006508
Spst3g01182 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Spst3g01182 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 127 IPR001563 GO:0004185|GO:0006508
Spst3g01182 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 178 IPR001563 GO:0004185|GO:0006508
Spst3g01182 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 437 IPR001563 GO:0004185|GO:0006508
Spst3g01182 457 FunFam Carboxypeptidase 351 450 - -
Spst3g01182 457 Gene3D alpha/beta hydrolase 20 282 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01182 Spst-Chr3 15314323 15317155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01182 313 453 Calmodulin-binding Proteins AT2G22960 28.369 4.86e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01182 K16297 - gmx:100800002 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01182 3 15314323 15317155 Spst3g01182 3 15314323 15317155 ECH