Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01181 ATGGCTCCCTCAGAACAATCTCGCCACTCTCTTGTCCCTGGATTCTTGTACTCGTCGAAAACACTGTCCCATTTGAATAATAACACCAATCATGGGTTGCCATTGATACCATCATCCTCCAATGCATCGCATTCATCATCATCATCGTCGCCCCTGCAGGATGGGGCCAAGAGTCCTGTGATCCTTTCACCAAAAGAGAGAATCCGCATGTTTTCTCCTGCTTACTATGCAGCATGCAGTGCAGGTGGGGTCTTCAGTTGTGGACTTACCCACATGGCTGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGATCCTTTAAAGTACAAGAGCATCTCATCAGGATTTGGAGTGTTACTGAAGGAACAGGGTGCTAAAGGTTTCTTCAGGGGATGGGTGCCTACTCTGTTGGGGTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAGTTCTTCAAGAAGTATTACTCAGACCTTGCAGGACCCGAGAATGCAGTGAAGTACAAAACAGTCATATATCTAGCTGGTTCTGCTTCAGCTGAAGTTATTGCTGATATTGCCCTTTGCCCTATGGAGGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTAGAGGTTTGTCAGATGGGTTGCCCAAGTTTATCAAGGCTGAGGGTGCTTCTGGGTTGTATAAAGGTCTCGCTCCTCTTTGGGGCCGCCAAATTCCATACACAATGATGAAATTTGCTTCCTTTGAGACTGTCGTGGAGATGATATACAAATACGCCATCCCAATCCCTAAGGAGAAGTGCAGCAAAAATAAGCAGCTTGGAGTGAGTTTTGCAGCAGGATATATTGCGGGTGTGCTGTGTGCAATTGTCTCACACCCTGCTGACAACCTCGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTGTTGGTGATGCTGTAAAGAAAATTGGGATGTTAGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACCCTAACTGGGGCACAGTGGGGACTCTATGATTCATTTAAAGTATTTGTAGGACTGCCTACCACTGGAGGAAGTGCTCCTGCTCCTGCCCCTGTTAAGTAG 1107 0.467 MAPSEQSRHSLVPGFLYSSKTLSHLNNNTNHGLPLIPSSSNASHSSSSSSPLQDGAKSPVILSPKERIRMFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPLKYKSISSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTVIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKAEGASGLYKGLAPLWGRQIPYTMMKFASFETVVEMIYKYAIPIPKEKCSKNKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAPAPVK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01181 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 158 IPR018108 -
Spst3g01181 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 53 362 IPR044677 GO:0005315|GO:1990547
Spst3g01181 368 FunFam Phosphate carrier protein, mitochondrial 74 352 - -
Spst3g01181 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 351 IPR018108 -
Spst3g01181 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 255 IPR018108 -
Spst3g01181 368 MobiDBLite consensus disorder prediction 33 58 - -
Spst3g01181 368 Pfam Mitochondrial carrier protein 77 160 IPR018108 -
Spst3g01181 368 Pfam Mitochondrial carrier protein 174 259 IPR018108 -
Spst3g01181 368 MobiDBLite consensus disorder prediction 33 56 - -
Spst3g01181 368 SUPERFAMILY Mitochondrial carrier 75 346 IPR023395 -
Spst3g01181 368 Gene3D Mitochondrial carrier domain 75 352 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01181 Spst-Chr3 15303540 15305957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01181 5 365 Chloroplast and Mitochondria Gene Families AT5G14040 76.902 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01181 K15102 - gmx:100800530 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01181 3 15303540 15305957 Spst3g01181 3 15303540 15305957 ECH