Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01179 ATGGCAGCTTTTTCACCCCAACACTACCGTCCCTTTCTAGTTGACTCCCCATGCTTCTCAATCAATCCTCCCCTAAAGAAACTCTCTTCTTTCGGGGACCAACAACCCCTTATAAACACTACTTCTACCCTTCCTCCTTCTCATTATTTCCACAATACTCTTCACCAGGAAACGTCTCATAGTGTCACTAATCAAGAAACTAGCTGTGTCGATCAAAGCTCCAAGGCTACCATCAGTGACACTGAGCCTTCTGTGGTAAAAAACTACAGTCCTGAGACATCCATGGTTGTGGACAAGCTTGAAAAAGGTGAACAGGTCACTCAGAAAGTGACCCCTACGCAGAAGAAGAGAAGGGCAAGAAACGGATCTTCCTTGAGCAGCCCCTTATCAAAGGACTCAGCAGAAGGGGTAAACAAGAAACAAAATCATAGGAATGGTGGGGTGAAAGGAGAAAACAAGCCAAAAGAAGTGCAGAATGATCAGAAAAATGGTCCAGAAGATCCTCCAACGGGGTATATCCACGTTAGAGCAAGAAGGGGTCAAGCAACGGATAGCCACAGCCTTGCTGAAAGGGTACAATGCATCACTCTCAACAACTATATTTGA 606 0.4521 MAAFSPQHYRPFLVDSPCFSINPPLKKLSSFGDQQPLINTTSTLPPSHYFHNTLHQETSHSVTNQETSCVDQSSKATISDTEPSVVKNYSPETSMVVDKLEKGEQVTQKVTPTQKKRRARNGSSLSSPLSKDSAEGVNKKQNHRNGGVKGENKPKEVQNDQKNGPEDPPTGYIHVRARRGQATDSHSLAERVQCITLNNYI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01179 201 MobiDBLite consensus disorder prediction 57 91 - -
Spst3g01179 201 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 61 192 IPR024097 GO:0006355
Spst3g01179 201 MobiDBLite consensus disorder prediction 106 135 - -
Spst3g01179 201 MobiDBLite consensus disorder prediction 136 162 - -
Spst3g01179 201 MobiDBLite consensus disorder prediction 57 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01179 Spst-Chr3 15283848 15284715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01179 139 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 54.545 6.10e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01179 - - pvu:PHAVU_002G283100g 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01179 3 15283848 15284715 Spst3g01179 3 15283848 15284715 ECH