Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01177 ATGGATGATGGCCGTCAACATGAAAATGATAGGCATAAGATGGAATACTATAGAGGAGCACATTCCCTGTGGAATACTGATTCCCAGCATCAAGTGAAAGAGCCAAATGCACTAGTTATGAATAAGAAGATTAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTCTAGAACTTGAACTAGAGACTGCAATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGCAGCCATTCGGCAGAGGGATGAAGCACTTGCTCAAAGGGATAATGCCCTTTTGGAACGGGATAATGCCCTTGCAGCCCTTCAGAGTCGGAACAATTCTGTCAACTTTCCATTTGGCAGTGGAATTCAATGTGGATCGAAACGAATGCACCATTCTTCAAACCATCTATCTAACATGTCTGAATCCACATACAAAACAAGGGACATGATGATAAAGGATGCCTCCCCAGTGAGCGTTACACCTTCTGAAGCTGTCAAATCTCATCAAGCAAAGAGAACAAAGGAGAACAAGGTAATTACTTCCAAGGCATCAAACCCACCCTACAAAGTAAAGAAAATGGGTGAGGATTTAAATAGGAAGGCATCTTTTGAAGGTACAAAGATCAGATCTGAATGGCATAGGCAAGATGTTGGCCTGAATTTGGTTACATTTGATGAAACTACCATGCCGGTTCCAGTTTGCACATGTACTGGCACACCACGACAGTGCTACAAATGGGGGAATGGTGGATGGCAATCATCTTGTTGTACCACAACATTGTCTATGTATCCATTACCACAGCTTCCAAACAAGCGCCATGCTCGCATTGGAGGACGAAAGATGAGTGGGAGTGTCTTTACGAGACTTCTCAGTAGGTTGGTGTTAGAAGGCCATGATTTATCTATACCGTTAGATCTTAAGGAGTACTGGGCCAGACACGGAACAAATCGCTACATCACTATCAAGTAA 954 0.435 MDDGRQHENDRHKMEYYRGAHSLWNTDSQHQVKEPNALVMNKKIRSIMAERQAAILELELETAISEKNEALAARDAAIRQRDEALAQRDNALLERDNALAALQSRNNSVNFPFGSGIQCGSKRMHHSSNHLSNMSESTYKTRDMMIKDASPVSVTPSEAVKSHQAKRTKENKVITSKASNPPYKVKKMGEDLNRKASFEGTKIRSEWHRQDVGLNLVTFDETTMPVPVCTCTGTPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVLEGHDLSIPLDLKEYWARHGTNRYITIK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01177 317 MobiDBLite consensus disorder prediction 151 173 - -
Spst3g01177 317 PANTHER - 14 317 IPR010409 -
Spst3g01177 317 SMART GAGA_bind_2 1 317 IPR010409 -
Spst3g01177 317 Coils Coil 53 73 - -
Spst3g01177 317 Pfam GAGA binding protein-like family 1 317 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01177 Spst-Chr3 15272550 15273596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01177 1 317 BBR or BPC Transcription factor family AT2G21240 58.307 6.27e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Spst3g01177 GAGA_bind 7e-99 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01177 - - gmx:100813103 586.26