Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01175 ATGGGTTGCGCCCTCGGAAAGCCGGCGGATTCCGTCGACAATCAACGGCATAAAACCGAGACTGCCGGCGGCGGAAATGATGCTATTAAGGTTCGGGAAAAGCAGAAGAGTCCTCACGTCGGCGAACTTTCCGGCGTGGTTCCGGCGCCGGAGCGACGGAGATTTCGACTTGACTCATTCACTGCGAGCCATCGGGGGTGGCCGTCGTGGCTGATGGTTGTCGCCGGCGAAGCACTCGGAGACTGGACTCCTCGCCGTGCCAACACGTTCGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAATGTGTATAAAGCAAGGGACCTTGTAACTGGGAAGATAGTGGCTTTGAAGAAGGTCAGATTTGACAATTTGGAAGCAGAGAGTGTGAAGTTCATGGCAAGAGAGATTCTTGTTTTGAGGAGGCTTGATCACCCCAATGTTGTGAAGCTTGAGGGGTTGGTTACTTCAAGAATATCATCCAGTCTTTACTTGGTATTTGAGTACATGGAACATGATCTTGCTGGTCTTGCAGCTGGTGTGGGTGTCAAATTCTCTGAGCCTCAGATCAAATGCTATATGAAGCAATTGCTATCTGGCCTTGAGCATTGCCACAGCAGAGGTGTTTTGCACCGTGATATTAAGGGTTCCAATCTGCTCATTGACAATGAAGGCATACTTAAAATTGCAGATTTTGGATTGGCAACTTTCTCTGATCCTAAGCAAAAGCATCCTATGACCAGTAGAGTTGTGACCCTTTGGTACCGTCCCCCTGAGCTTCTTGTGGGGGCTACATCTTATGGTGTTGGTGTCGACCTTTGGAGTGCTGGCTGCATCTTGGCAGAGCTGCTTGCTGGAAAGCCAATCATGCCTGGCAGAACAGAGGTATTGTTCTCTGTGTTGTTCCATGACTTGCTTTTGTTGGTGAAGTGGGGGGCTAAGGTTGAGCAGCTGCACAAAATATTTAAGTTATGTGGCTCTCCATCTGAGGAATATTGGAAGAAATATAGATTGCCAAATGCCACACTCTTTAAGCCACAGCAACCGTATAAAAGAAACATTTTAGAAACATTCAAGGATTTTCCTTCTTCTTCATTACCTCTGATTGAAACTCTTCTTGCAATAGATCCTAATGATCGTGGCACTACCTCATCTTCTCTAAATAGTGAATTCTTTGCCACTGAGCCCTGTGCTTGTGAACCATCTAGTTTGCCAAAGTATCCTCCCACCAAAGAATTGGATATAAAACTGAGAGATGAAGAAGCAAGAAGGCTGAAAGCTCTAAGTGGAAAAAATAATGCAGTTGATGGTGCCAGAAGGGTTAGAGTACGCGAGCGCGGTTTGGCCATTCCGGCCCCAGAAGCCAATGCAGAGATCCAAACAAACTTAGATAGGTGGAGAATTGTGACCCATGCAAATGCAAAATGTAAGAGTGAGAAATTTCCACCTCCCCATCAGGATGGAGCTGTTGGATATCCACTGGATGCATCAAATAAAGGAGCTGTTTCATTTGGAGCCACTGAAACTTCCACAGCCTCTACCATATTTGATTCAAAATCTTCTGGATCTGTTAAAAGTCATGGTGCTGCCAGAGACAAAGTGAGGAGAAGCAATACAGCAGATTCCCAGATGGCATCAACTTGGAAATCTTTGCGTTCATTCAAGCTATCAACAATTGGTCATTCATTTGATTTATTATTTAGAAGCAAATAA 1716 0.4563 MGCALGKPADSVDNQRHKTETAGGGNDAIKVREKQKSPHVGELSGVVPAPERRRFRLDSFTASHRGWPSWLMVVAGEALGDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEAESVKFMAREILVLRRLDHPNVVKLEGLVTSRISSSLYLVFEYMEHDLAGLAAGVGVKFSEPQIKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFSDPKQKHPMTSRVVTLWYRPPELLVGATSYGVGVDLWSAGCILAELLAGKPIMPGRTEVLFSVLFHDLLLLVKWGAKVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRNILETFKDFPSSSLPLIETLLAIDPNDRGTTSSSLNSEFFATEPCACEPSSLPKYPPTKELDIKLRDEEARRLKALSGKNNAVDGARRVRVRERGLAIPAPEANAEIQTNLDRWRIVTHANAKCKSEKFPPPHQDGAVGYPLDASNKGAVSFGATETSTASTIFDSKSSGSVKSHGAARDKVRRSNTADSQMASTWKSLRSFKLSTIGHSFDLLFRSK 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01175 571 Gene3D Transferase(Phosphotransferase) domain 1 173 431 - -
Spst3g01175 571 MobiDBLite consensus disorder prediction 517 544 - -
Spst3g01175 571 SMART serkin_6 90 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01175 571 SUPERFAMILY Protein kinase-like (PK-like) 84 397 IPR011009 -
Spst3g01175 571 PANTHER CELL DIVISION PROTEIN KINASE 88 397 - -
Spst3g01175 571 Gene3D Phosphorylase Kinase; domain 1 77 172 - -
Spst3g01175 571 MobiDBLite consensus disorder prediction 1 44 - -
Spst3g01175 571 FunFam probable serine/threonine-protein kinase At1g54610 173 433 - -
Spst3g01175 571 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Spst3g01175 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Spst3g01175 571 ProSiteProfiles Protein kinase domain profile. 90 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01175 571 FunFam probable serine/threonine-protein kinase At1g54610 77 172 - -
Spst3g01175 571 CDD STKc_CDK9_like 90 393 - -
Spst3g01175 571 Pfam Protein kinase domain 90 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01175 Spst-Chr3 15259893 15264046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01175 82 425 Core Cell Cycle Gene Families AT5G10270 47.778 9.08e-110 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Spst3g01175 Pkinase 2.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01175 K08819 - gmx:100789359 976.852